Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 536 2e-147
seq7375 100 4e-16
>seq4562
Length=21325
Score = 536 bits (594), Expect = 2e-147
Identities = 1097/1615 (68%), Gaps = 27/1615 (2%)
Strand=Plus/Minus
Query 70781 TTATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGAT 70840
||||||| | ||||| | ||||||||||| | | | ||| | ||| || |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 70841 AGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 70900
||||||| |||||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 70901 AATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCC 70960
|||| |||| | || | || || || | || |||||||| || || || ||||| |
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 70961 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 71019
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 71020 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAAT 71075
| |||| | |||| |||| ||| | |||| | || |||||| | || | |||||
Sbjct 20860 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAAT 20803
Query 71076 CCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGG 71135
||||| || ||||||| ||| || | | || ||| | | || |||||| |
Sbjct 20802 AAGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 20743
Query 71136 ATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGG 71195
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||
Sbjct 20742 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 20683
Query 71196 TTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255
||| | || ||| | || || | |||||| ||||| || |||||||||||||| || |
Sbjct 20682 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTAT 20623
Query 71256 CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCA 71315
||||||| ||| | | ||||||| | || || ||||| || |||| | |||
Sbjct 20622 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCA 20563
Query 71316 AAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGA 71375
||| || | || || || | || ||
Sbjct 20562 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACT 20503
Query 71376 TCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGC 71435
||| |||||| ||||| ||||||||||| |||| ||||||||| || |||| |||
Sbjct 20502 CCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGC 20443
Query 71436 TCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAA 71495
||||||||||| ||||| || || | | ||||||| | ||||| | || || |
Sbjct 20442 ACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTA 20383
Query 71496 TGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTC 71554
| ||| | | | | | |||||| ||||| | || ||||| |||||||| |||||||
Sbjct 20382 AG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 20324
Query 71555 TGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 71614
| |||||| |||| ||| ||| ||||| || | ||||||| |||||| ||| |||| ||
Sbjct 20323 TATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTT 20264
Query 71615 TATTGAGATTTCTGACTATTA--CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT 71672
| || | |||| ||| | | ||||| | || |||| ||| ||||| ||||||
Sbjct 20263 TGTTTAAATTT-TGAGTTACAATCTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAATCT 20206
Query 71673 CCCATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732
|| | ||||||| ||| | || | || || || || || || || || ||||
Sbjct 20205 GTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT- 20147
Query 71733 AGCATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 71789
| || | | ||||| | || || ||||||||||| ||||| || || || || |
Sbjct 20146 --CTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAG 20089
Query 71790 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGT 71849
||||| ||||||||||||| ||||||| ||||||||||| | || | || ||||||||
Sbjct 20088 ATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGT 20029
Query 71850 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTA 71909
|| | || | ||||||||| | ||||| | || |||| | | | || | |
Sbjct 20028 CTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTATAAA 19969
Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT- 71968
|| |||||| ||| |||| ||||||||| ||| || || ||||| ||||| |
Sbjct 19968 TCGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCA-AAGCAGTCAG 19910
Query 71969 CTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTT 72028
| | ||||||| |||| |||||||| | ||| || |||| | | ||||| ||
Sbjct 19909 CGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTT 19850
Query 72029 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 72088
||||||| ||||| || ||||| | ||| ||| || ||||| | ||| || || |
Sbjct 19849 TCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCT 19790
Query 72089 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 72148
| ||||| ||||| || | ||| | ||| | | || || | |||||| || || || |
Sbjct 19789 TACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAAT 19730
Query 72149 ATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 72208
| || || | | || || ||||||||||| || ||||||| ||||| || || || |
Sbjct 19729 AAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGT 19670
Query 72209 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 72268
|||| |||||||||||||| | | |||||| || | ||||| || || | || ||
Sbjct 19669 TATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAG 19610
Query 72269 TTCCACTG-GCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325
|| ||| || | || | || || || |||||| || || || |||||| |
Sbjct 19609 AACC-CTGAGCTCTGATGCAATGTGTAT--GTAAACCTATGCCACCAGCAGATTTAGAAA 19553
Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
||||||| ||| ||||||| |||||| | || || || || ||||| || ||||
Sbjct 19552 TTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCAT 19498
Score = 93.3 bits (102), Expect = 6e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620
||| || ||||| |||||||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 18970 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 18911
Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
| ||| |||| || |||| ||| | || | | ||| ||||| | |||
Sbjct 18910 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831
|| || || || || |||| ||| |||| ||||||||||| || | ||||||||||||
Sbjct 18225 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 18166
Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 18165 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 18106
Query 72892 GTTACTCCATTATATATTCC 72911
||||| ||| |||||| ||
Sbjct 18105 GTTACACCAGAATATATGCC 18086
>seq7375
Length=9560
Score = 100 bits (110), Expect = 4e-16
Identities = 79/95 (83%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610
|| |||| |||||||||||| | |||||||| |||||||| || ||||||||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|| ||||| ||||||| |||||||| ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 669847600998840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |