Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq89413 123 2e-23
seq9095 100 2e-16
seq27008 98.7 8e-16
seq133270 86.0 5e-12
seq58137 82.4 6e-11
>seq89413
Length=986
Score = 123 bits (136), Expect = 2e-23
Identities = 184/261 (70%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 101024 GGCTCGTTCCATGCGGACACGCCCTTTTGCGGTTTTTGTATTGCGGCCCAGGGATCGTGA 101083
||||||||||||| |||| || ||||| |||||||||| ||| ||||| ||||||||
Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927
Query 101084 ATGGCGACTTTGAAATCTGAACGACCCTTGCAGGAGCGCTGCAGCGCTTCAAAACTGCCG 101143
|| | ||||||||| || ||| || | ||||| ||||| || |||| ||||||||
Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867
Query 101144 GGAATGGTTTTGAGGGCGTCGTTGAGGCCGTCGCCGCCGCAAATGGGTATGAACCCGTAC 101203
|| ||| | || |||| |||||| ||||||||||| || || || |||||
Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807
Query 101204 AACAGATGCGAGAGATTGGGCAGCGGCACTTTGTCTACCGGAAAATTGCGGCCGTACACG 101263
| || || | ||||| || | || | ||||| || || || | || ||
Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747
Query 101264 CCCCACTCTACAAAATACGCA 101284
||||| ||||| || || |||
Sbjct 746 CCCCATTCTACGAAGTAGGCA 726
>seq9095
Length=14658
Score = 100 bits (110), Expect = 2e-16
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
|||| |||| || || || || | |||||| ||||| || || ||||| |||||||| |
Sbjct 6208 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 6267
Query 18873 CCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCC 18928
| ||| |||||| || ||||| || || ||| |||||||||| ||||||||
Sbjct 6268 ATAGTGT----GCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCT 6323
Query 18929 ACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGC 18988
||| | |||||||| || ||||||| ||| || | | | ||||| ||||
Sbjct 6324 GGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGC 6383
Query 18989 TCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| ||| | || || || || || || | || || || ||||||||||||
Sbjct 6384 TCAACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 6437
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/234 (69%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
|||| |||| || || || |||| ||||| ||||| ||||| ||||||||||| || |
Sbjct 5980 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6039
Query 18873 CCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCC 18928
| || |||||| || ||||| || || ||| |||||||||| || |||||
Sbjct 6040 ATAGAGT----GCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCT 6095
Query 18929 ACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGC 18988
||| | ||||||||| || |||||| || || | | | ||||| ||
Sbjct 6096 GGGGGAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCT 6155
Query 18989 TCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
||| ||| | || || ||||| || || | ||||| ||||| |||||||||
Sbjct 6156 TCCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 6209
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
||||||| |||||| ||||||||||| || ||||| || || | || ||| | ||
Sbjct 6453 AACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCT 6512
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
|| || || || || || |||| ||||| || ||||| || | ||| || |||||
Sbjct 6513 TCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 6572
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
||| || ||||| | ||| ||||| || ||| ||| | || ||||||
Sbjct 6573 TGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTT 6632
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTAAATCT 19050
|| || ||||||||||| || || |||||||| | |||||
Sbjct 6633 TTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATGAATCT 6673
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
||||| | ||||| ||||||||||| || ||||| || || | || ||| | ||
Sbjct 4857 AACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCT 4916
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
||||| || || || ||| |||| ||||| || ||||| || | ||| ||||||||
Sbjct 4917 TCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCC 4976
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
||| || ||| || | ||| || || || ||| ||| | |||||| |||
Sbjct 4977 TGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTT 5036
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || || | ||||| ||||||||||||||
Sbjct 5037 TTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898
||||| ||||||||||| || ||||| || || | || ||| | || ||||| ||
Sbjct 5550 TGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGC 5609
Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958
|| || || |||| ||||| || ||||| || | ||| |||||||| ||| ||
Sbjct 5610 TTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTT 5669
Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018
||| || | ||| || || || ||| ||| | |||||| ||||| || ||
Sbjct 5670 GCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTC 5729
Query 19019 AAAGTTTTGACAAAAATTTGCAT 19041
| ||||| ||||||||||||||
Sbjct 5730 AGTGTTTTCACAAAAATTTGCAT 5752
>seq27008
Length=12848
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25230 CGCAAAAACGGGCATTGCGGCGCCCATTTTTGATGATCGCGAGCCGGGTCGTCGCCCGCC 25289
|||| || ||||| || |||||||| || || || || || |||||||||||
Sbjct 4643 CGCAGGAAGGGGCACTGGGGCGCCCAGCGCTGGTGGTCCTTGGCGGGATCGTCGCCCGCA 4702
Query 25290 TCCCAGCGCATAATCTCCACTTTGCAAAACGCGCAGCGCACTTCGTCGCCGCGTCCCAAG 25349
|||| |||||| || ||||| |||||||||||||| ||||| |||||||| ||||
Sbjct 4703 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGA 4762
Query 25350 TAGTAGAACCCATT 25363
|| ||||| |||||
Sbjct 4763 TAATAGAAGCCATT 4776
>seq133270
Length=334
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946
|| |||| || ||||| ||| | ||||| | ||||||||| || | ||||||||||
Sbjct 29 TCTTCCAATTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCTTTG 88
Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006
|| |||||| |||||| | | | |||||| || ||| ||| | |||||||
Sbjct 89 TCTTGAATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATG 148
Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || || |||| ||||| |||||||| |||||
Sbjct 149 GTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 183
>seq58137
Length=8097
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/230 (68%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
|| |||| ||| | ||||| || |||||||||||||| || | | || ||||
Sbjct 7744 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCT 7685
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
|||| || || || || |||| | | || ||||| || | ||| || |||||
Sbjct 7684 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 7625
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
|||||| |||||| | | | ||||||| ||| || ||| | |||||||||
Sbjct 7624 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 7565
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT-AAATCTCTTATAAA 19058
||||| || | ||||| ||||| || |||||||| | |||| | | |||
Sbjct 7564 TTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATATCTGTAACAAA 7515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413794905832846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |