Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 129 4e-25
seq9095 104 1e-17
seq21475 96.9 2e-15
>seq58137
Length=8097
Score = 129 bits (142), Expect = 4e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| || | || || |||||||| |||||||| ||||| | || || |
Sbjct 7747 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCG 7688
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||||||||||||| || || |||||||| || || | || |||||||| ||
Sbjct 7687 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 7628
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| |||||| ||| ||| || ||| |||| ||| |||| ||| ||
Sbjct 7627 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 7568
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTTAT 33375
||||| |||||||| ||||| || || || ||||| || ||
Sbjct 7567 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGAT 7527
>seq9095
Length=14658
Score = 104 bits (114), Expect = 1e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||||| |||||||| |||||||| || ||||| || || ||||| || || |||
Sbjct 4842 CCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 4901
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| || | || |||| |||||||||| ||| || | | ||| || || | ||
Sbjct 4902 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGA 4961
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
||||||||||| || |||| ||| || ||| || ||||| | || ||
Sbjct 4962 ATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 5021
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| | || || ||||| || || || ||||| || |||||||||||
Sbjct 5022 TCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||||| ||||| || |||||||| || ||||| || || ||||| || || |||
Sbjct 5526 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 5585
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| || | || |||| |||||||||| || || | | ||| || || | ||
Sbjct 5586 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 5645
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
||||||||||| || |||| ||| || ||| || ||||| | || ||
Sbjct 5646 ATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACT 5705
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| | || || ||||| || || || ||||| || |||||||||||
Sbjct 5706 TCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| | ||| | || | ||||| || || ||||| || || |||||||||||
Sbjct 6210 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 6269
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || || || || | ||||||||| ||| || | | |||||| || | |||
Sbjct 6270 AGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 6329
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| || ||||| || ||| | ||| || ||| ||| || || || | |||
Sbjct 6330 ATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 6389
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| | ||| || || || || || || || |||||||||||||||||
Sbjct 6390 TCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 6436
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| ||||| || ||||| || || ||||| || || ||||| || |
Sbjct 6450 CGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 6509
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| || | ||||||||| || || | | ||| || || | || |||||||| ||
Sbjct 6510 TCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 6569
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| ||||| ||| || || || | || || |||| ||
Sbjct 6570 TCTTGAATCTTTGCC---TTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTG 6626
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370
|| ||||| || || | |||||||||||| |||||||||
Sbjct 6627 ATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 6665
>seq21475
Length=13715
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||| | ||||||||| || || ||||| || ||||| |||||||| | || || ||
Sbjct 11105 CACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTC 11046
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTC 33276
| ||| || ||| ||| || |||||||||||||| | || || ||||| || ||
Sbjct 11045 TAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTG 10986
Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336
| | | || |||||| ||| || || || || | || || || || || ||
Sbjct 10985 GATTTTAGC---TTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGT 10929
Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| |||||||| || || ||||||||||||||
Sbjct 10928 TTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 10896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318179453581182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |