Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 98.7 8e-16
seq9095 98.7 8e-16
seq89413 93.3 4e-14
seq133270 87.8 2e-12
>seq58137
Length=8097
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || || | | ||| ||||| || || |||||||||||||| || ||||| ||
Sbjct 7761 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAG 7702
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| || ||||||||||| || || || |||| | | |||||||| |
Sbjct 7701 AAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 7642
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||| ||||| |||||| ||| || | ||| || |||| ||||||
Sbjct 7641 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 7582
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
||||| ||||||||||| || || | ||||| ||||| || ||||||||
Sbjct 7581 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
>seq9095
Length=14658
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||| || | |||||| ||||| | ||||| || || || || || || ||
Sbjct 4840 TTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 4899
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
|| || |||||||| ||| || || ||| |||| || || |||||||| |
Sbjct 4900 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAG 4959
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||||||||| ||| ||| ||| || | | | | || || ||||
Sbjct 4960 GAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCA 5019
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | |||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 5020 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057
|| ||||||| |||||||| || || |||||||| || ||||| | | |||||
Sbjct 5088 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTG--ATAGTGTGCGTCCATCTT 5145
Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117
| | |||||| || || |||||||||||||||| || ||| | || || || ||
Sbjct 5146 CAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTT 5205
Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177
||||||| ||| || | ||| | || ||| || ||| | ||||| ||||
Sbjct 5206 GAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTT 5265
Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
| || || | |||||| ||||||||||||||
Sbjct 5266 TACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||| || | ||| || ||||| | ||||| || || || || || || ||
Sbjct 5524 TTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 5583
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
|| || |||||||| ||| || || || |||| || || |||||||| |
Sbjct 5584 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAG 5643
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||||||||| ||| ||| ||| || | | | | || || ||||
Sbjct 5644 GAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCA 5703
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | |||||| |||||||| |||| ||||| ||||||||||||||
Sbjct 5704 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
>seq89413
Length=986
Score = 93.3 bits (102), Expect = 4e-14
Identities = 177/261 (68%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 101714 GGCTCGTTCCAAGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGG 101773
||||||||||| | ||| | ||||| || |||||||||| ||| ||||| |||||||||
Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927
Query 101774 ATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCG 101833
|| | ||||| || || |||||| || || || || | |||| ||||| ||
Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867
Query 101834 GGTATGGTTTTGAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTAC 101893
|| ||| | || || | ||| || ||||| ||||| || || || |||||
Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807
Query 101894 AACAAATGTGAGAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACG 101953
| ||| || | || || || | || | || || || || || | | ||| ||
Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747
Query 101954 CCCCATTCTACAAAATACGCA 101974
||||||||||| || || |||
Sbjct 746 CCCCATTCTACGAAGTAGGCA 726
>seq133270
Length=334
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 20053 ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTT 20112
|||||||||||| || || ||| | ||||| | ||| ||||| || | ||| |||||
Sbjct 28 ATCTTCCAATTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCTTT 87
Query 20113 GTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAAT 20172
||| |||||| ||| || | ||| || ||| |||||| ||||| ||||||
Sbjct 88 GTCTTGAATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAAT 147
Query 20173 GGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| || || || | ||||| |||||||| |||||
Sbjct 148 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 183
Score = 82.4 bits (90), Expect = 6e-11
Identities = 83/106 (78%), Gaps = 4/106 (4%)
Strand=Plus/Plus
Query 20012 GTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTTCCAATTGTTTGC 20069
|||||||||||||| |||||||| || ||||| | || |||||| ||||| ||||
Sbjct 215 GTAGATTCTTTTTGGATGTTGTAGTCAG--ATAGTGTACGACCATCTTCTAATTGCTTGC 272
Query 20070 CCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115
||||| ||||||| | |||||||| || | ||||||||||||
Sbjct 273 CCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418799896936479
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |