Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq17440 129 3e-25
seq17443 127 1e-24
seq17441 125 4e-24
seq64158 122 5e-23
seq17471 122 5e-23
seq14914 120 2e-22
seq61083 116 2e-21
seq33193 116 2e-21
seq3620 116 2e-21
seq79708 114 7e-21
seq66179 114 7e-21
seq46255 114 7e-21
seq21836 114 7e-21
seq15892 113 2e-20
seq17470 109 3e-19
seq60725 100 1e-16
seq19703 82.4 4e-11
>seq17440
Length=3326
Score = 129 bits (142), Expect = 3e-25
Identities = 87/97 (90%), Gaps = 1/97 (1%)
Strand=Plus/Plus
Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493
|||| |||||||||| || ||||||||||| |||||||||| ||||||||||||||
Sbjct 2367 AGAAAAAATAAAAAATATAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 2426
Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||||||||||| |||||||||||||||||||||
Sbjct 2427 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 2463
>seq17443
Length=8049
Score = 127 bits (140), Expect = 1e-24
Identities = 91/103 (88%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 11429 AAATATAGAATTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486
|||| || ||||||||||| | | | |||||||||||| |||||||||| |||||||
Sbjct 479 AAAT-TACAATTAATAAAACAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTT 421
Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct 420 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 378
Score = 127 bits (140), Expect = 1e-24
Identities = 89/101 (88%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488
|||| ||||| || ||||||| | ||||||||||| |||||||||| |||||||||
Sbjct 6728 AAATTTAGAAAAAAAAAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 6785
Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||||||||||||| ||||||||||||||||||||
Sbjct 6786 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6826
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 7489 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 7548
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||||||||
Sbjct 7549 CTGAGCTAATGGGCC 7563
>seq17441
Length=3252
Score = 125 bits (138), Expect = 4e-24
Identities = 88/100 (88%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 11434 TAGAATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491
|| |||||||| |||| | | ||||||||||| |||||||||| ||||||||||||
Sbjct 1395 TATAATTAATATAAAAGAATAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 1336
Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
||||||||||||||||| ||||||||||||||||||||||
Sbjct 1335 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 1296
Score = 113 bits (124), Expect = 2e-20
Identities = 81/94 (86%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|| ||| | |||| | |||||||||| |||||||||| |||||||||||||||||
Sbjct 76 AACTAAAATAAAAAGATTTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTA 135
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||||||||| |||||||||||||||||||||
Sbjct 136 GCACGACGCTCTAACCAACTGAGCTAATGGGCCG 169
>seq64158
Length=1040
Score = 122 bits (134), Expect = 5e-23
Identities = 87/100 (87%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 11434 TAGAATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491
|| |||| || |||| || | ||||||||||| |||||||||| ||||||||||||
Sbjct 940 TAAAATTTATTCAAAAACATACCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 999
Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
||||||||||||||||| ||||||||||||||||||||||
Sbjct 1000 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 1039
>seq17471
Length=7114
Score = 122 bits (134), Expect = 5e-23
Identities = 79/86 (92%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 11445 AAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 5490 AAAAATTAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 5549
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 5550 GCTCTAACCAACTGAGCTAATGGGCC 5575
>seq14914
Length=10843
Score = 120 bits (132), Expect = 2e-22
Identities = 79/88 (90%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||||||| || |||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 2699 TAAAAAACAAAGATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 2640
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| |||||||||||||||||||||
Sbjct 2639 CGCTCTAACCAACTGAGCTAATGGGCCG 2612
>seq61083
Length=777
Score = 116 bits (128), Expect = 2e-21
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 625 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 566
Query 11516 TGAGCTAATGGGCCGT 11531
||||||||||||||||
Sbjct 565 TGAGCTAATGGGCCGT 550
>seq33193
Length=5224
Score = 116 bits (128), Expect = 2e-21
Identities = 79/88 (90%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||||||| | | |||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 3380 AAAAAATGTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 3439
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| |||||||||||||||||||||
Sbjct 3440 CGCTCTAACCAACTGAGCTAATGGGCCG 3467
>seq3620
Length=10358
Score = 116 bits (128), Expect = 2e-21
Identities = 72/78 (92%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
|| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 4036 AACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 3977
Query 11512 CAACTGAGCTAATGGGCC 11529
||||||||||||||||||
Sbjct 3976 CAACTGAGCTAATGGGCC 3959
Score = 116 bits (128), Expect = 2e-21
Identities = 79/88 (90%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
|||| |||| || ||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 8451 ATAACAAAT-AATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 8509
Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||| ||||| ||||||||||||||
Sbjct 8510 ACGCTCTAACCAATTGAGCTAATGGGCC 8537
>seq79708
Length=857
Score = 114 bits (126), Expect = 7e-21
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 150 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 91
Query 11515 CTGAGCTAATGGGCCGT 11531
|| ||||||||||||||
Sbjct 90 CTCAGCTAATGGGCCGT 74
>seq66179
Length=4994
Score = 114 bits (126), Expect = 7e-21
Identities = 78/87 (90%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
|||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 4257 TAAAAAATTCA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 4315
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||| |||||||||||||||||||
Sbjct 4316 CGCTCTAGCCAACTGAGCTAATGGGCC 4342
>seq46255
Length=5764
Score = 114 bits (126), Expect = 7e-21
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 5764 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5705
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 5704 TGAGCTAATGGGCCG 5690
>seq21836
Length=3710
Score = 114 bits (126), Expect = 7e-21
Identities = 76/85 (89%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| | |||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1295 AAAAATATATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 1236
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||||||||||||||||||
Sbjct 1235 CTCTAACCAACTGAGCTAATGGGCC 1211
>seq15892
Length=22919
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 17697 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 17756
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 17757 TGAGCTAATGGGCC 17770
>seq17470
Length=4652
Score = 109 bits (120), Expect = 3e-19
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
|||| |||| || ||||||||||| |||| ||||| |||||||||||||||||||||
Sbjct 2708 ATAACAAAT-AACTTGGCCCATGAGGGGATTGAACCCGTGACCTTCGCGTTATTAGCACG 2766
Query 11502 ACGCTCTRACCAACTGAGCTAATGGG 11527
||||||| ||||||||||||||||||
Sbjct 2767 ACGCTCTAACCAACTGAGCTAATGGG 2792
>seq60725
Length=4449
Score = 100 bits (110), Expect = 1e-16
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||| ||| ||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct 2208 TGGCCTTTGAGGGGATCGAACCTGCGACCTTCGCGTTATTAGCACGGCGCTCTAACCAAC 2267
Query 11516 TGAGCTAATGGG 11527
||||||||||||
Sbjct 2268 TGAGCTAATGGG 2279
>seq19703
Length=15148
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGG 11526
|||||||||| ||||||||| |||||||| |||||||||| || ||||||||||||||
Sbjct 9724 GGATCGAACCCGCGACCTTCGTGTTATTAGTACGACGCTCTAACTAACTGAGCTAATGG 9666
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261000544367884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |