Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq17440 129 3e-25 seq17443 127 1e-24 seq17441 125 4e-24 seq64158 122 5e-23 seq17471 122 5e-23 seq14914 120 2e-22 seq61083 116 2e-21 seq33193 116 2e-21 seq3620 116 2e-21 seq79708 114 7e-21 seq66179 114 7e-21 seq46255 114 7e-21 seq21836 114 7e-21 seq15892 113 2e-20 seq17470 109 3e-19 seq60725 100 1e-16 seq19703 82.4 4e-11 >seq17440 Length=3326 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| |||||||||| || ||||||||||| |||||||||| |||||||||||||| Sbjct 2367 AGAAAAAATAAAAAATATAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 2426 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 2427 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 2463 >seq17443 Length=8049 Score = 127 bits (140), Expect = 1e-24 Identities = 91/103 (88%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 |||| || ||||||||||| | | | |||||||||||| |||||||||| ||||||| Sbjct 479 AAAT-TACAATTAATAAAACAGATAACATTGGCCCATGAGGGGATCGAACCCGCGACCTT 421 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||| |||||||||||||||||||| Sbjct 420 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 378 Score = 127 bits (140), Expect = 1e-24 Identities = 89/101 (88%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 |||| ||||| || ||||||| | ||||||||||| |||||||||| ||||||||| Sbjct 6728 AAATTTAGAAAAAAAAAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 6785 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 6786 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 6826 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 7489 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 7548 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 7549 CTGAGCTAATGGGCC 7563 >seq17441 Length=3252 Score = 125 bits (138), Expect = 4e-24 Identities = 88/100 (88%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 11434 TAGAATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 || |||||||| |||| | | ||||||||||| |||||||||| |||||||||||| Sbjct 1395 TATAATTAATATAAAAGAATAGTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 1336 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||||||| |||||||||||||||||||||| Sbjct 1335 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 1296 Score = 113 bits (124), Expect = 2e-20 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||| | |||| | |||||||||| |||||||||| ||||||||||||||||| Sbjct 76 AACTAAAATAAAAAGATTTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTA 135 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||| ||||||||||||||||||||| Sbjct 136 GCACGACGCTCTAACCAACTGAGCTAATGGGCCG 169 >seq64158 Length=1040 Score = 122 bits (134), Expect = 5e-23 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 11434 TAGAATTAATAAAAAATCAAA--TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 || |||| || |||| || | ||||||||||| |||||||||| |||||||||||| Sbjct 940 TAAAATTTATTCAAAAACATACCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGT 999 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||||||||||||| |||||||||||||||||||||| Sbjct 1000 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 1039 >seq17471 Length=7114 Score = 122 bits (134), Expect = 5e-23 Identities = 79/86 (92%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 5490 AAAAATTAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 5549 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 5550 GCTCTAACCAACTGAGCTAATGGGCC 5575 >seq14914 Length=10843 Score = 120 bits (132), Expect = 2e-22 Identities = 79/88 (90%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| || |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 2699 TAAAAAACAAAGATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 2640 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 2639 CGCTCTAACCAACTGAGCTAATGGGCCG 2612 >seq61083 Length=777 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 625 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 566 Query 11516 TGAGCTAATGGGCCGT 11531 |||||||||||||||| Sbjct 565 TGAGCTAATGGGCCGT 550 >seq33193 Length=5224 Score = 116 bits (128), Expect = 2e-21 Identities = 79/88 (90%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||||| | | |||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 3380 AAAAAATGTATTCTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 3439 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||| ||||||||||||||||||||| Sbjct 3440 CGCTCTAACCAACTGAGCTAATGGGCCG 3467 >seq3620 Length=10358 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || ||||||||||| |||||||||| ||||||||||||||||||||||||||||| || Sbjct 4036 AACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 3977 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 3976 CAACTGAGCTAATGGGCC 3959 Score = 116 bits (128), Expect = 2e-21 Identities = 79/88 (90%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| |||| || ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 8451 ATAACAAAT-AATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 8509 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||| |||||||||||||| Sbjct 8510 ACGCTCTAACCAATTGAGCTAATGGGCC 8537 >seq79708 Length=857 Score = 114 bits (126), Expect = 7e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 150 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 91 Query 11515 CTGAGCTAATGGGCCGT 11531 || |||||||||||||| Sbjct 90 CTCAGCTAATGGGCCGT 74 >seq66179 Length=4994 Score = 114 bits (126), Expect = 7e-21 Identities = 78/87 (90%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 4257 TAAAAAATTCA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 4315 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||||||| Sbjct 4316 CGCTCTAGCCAACTGAGCTAATGGGCC 4342 >seq46255 Length=5764 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 5764 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5705 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 5704 TGAGCTAATGGGCCG 5690 >seq21836 Length=3710 Score = 114 bits (126), Expect = 7e-21 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1295 AAAAATATATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 1236 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 1235 CTCTAACCAACTGAGCTAATGGGCC 1211 >seq15892 Length=22919 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 17697 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 17756 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 17757 TGAGCTAATGGGCC 17770 >seq17470 Length=4652 Score = 109 bits (120), Expect = 3e-19 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| |||| || ||||||||||| |||| ||||| ||||||||||||||||||||| Sbjct 2708 ATAACAAAT-AACTTGGCCCATGAGGGGATTGAACCCGTGACCTTCGCGTTATTAGCACG 2766 Query 11502 ACGCTCTRACCAACTGAGCTAATGGG 11527 ||||||| |||||||||||||||||| Sbjct 2767 ACGCTCTAACCAACTGAGCTAATGGG 2792 >seq60725 Length=4449 Score = 100 bits (110), Expect = 1e-16 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| ||||||||||| |||||||||||||||||||||| |||||| |||||| Sbjct 2208 TGGCCTTTGAGGGGATCGAACCTGCGACCTTCGCGTTATTAGCACGGCGCTCTAACCAAC 2267 Query 11516 TGAGCTAATGGG 11527 |||||||||||| Sbjct 2268 TGAGCTAATGGG 2279 >seq19703 Length=15148 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGG 11526 |||||||||| ||||||||| |||||||| |||||||||| || |||||||||||||| Sbjct 9724 GGATCGAACCCGCGACCTTCGTGTTATTAGTACGACGCTCTAACTAACTGAGCTAATGG 9666 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261000544367884