Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1183 127 3e-25
seq51694 118 2e-22
>seq1183
Length=777
Score = 127 bits (140), Expect = 3e-25
Identities = 193/275 (70%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| | | | || || ||||||||||| || ||||| ||||| || |||
Sbjct 581 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 522
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| || || | || || ||||| ||| | || || || | || || |||| |
Sbjct 521 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 462
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | || ||||| | |||||| ||| || |||| || || || || || |||
Sbjct 461 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 402
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | ||||| |||||| ||||||| |||| || || |||| || || ||
Sbjct 401 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 342
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707
|| | | || || || || |||||| || |||
Sbjct 341 CGCACTCTGTACGGCTTCGGCGGTTAATATTTTAA 307
>seq51694
Length=6585
Score = 118 bits (130), Expect = 2e-22
Identities = 199/286 (70%), Gaps = 3/286 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||| || ||| | | | || | || ||||||||||| |||||||| ||||||||
Sbjct 3761 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 3820
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | || | ||||| ||||| || || | || || || | || ||||| |
Sbjct 3821 AAGAAGATTAGCAAGACGTGGCGGAGTTAAACGCATTTCCGGTTTAATTTACGAAGAAAC 3880
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||| | || |||||||| || || | | || || ||||| | ||||| ||
Sbjct 3881 TCGCGGAGTCTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTAACTTATACTGA 3940
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| | |||||||| || |||||||| | || ||||| |||||| | |||||
Sbjct 3941 ACACGCTAAAAGGAAGACTGTTACGGCCATGGATGTGGTTTATGCGTTGAAAAGACAAGG 4000
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT--CAAACTT 16715
||| | | ||||| |||||| | | || || | || |||||||
Sbjct 4001 CCGCACTTTATATGGATTTGGAGGATGAT-TTATGATAGCAAACTT 4045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78934434208587
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |