Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq8698 113 9e-21
>seq8698
Length=1311
Score = 113 bits (124), Expect = 9e-21
Identities = 345/524 (66%), Gaps = 22/524 (4%)
Strand=Plus/Plus
Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529
||||| || |||||||| || |||| |||| | |||||| ||| || |||||
Sbjct 418 AAAAAAAAATATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 476
Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589
||| | | ||| | || ||| || ||||| ||||| | ||| | || |||
Sbjct 477 AGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAGAAAAATA 533
Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649
||| || ||| ||| || |||| |||| | | ||| || |||||| | |||||
Sbjct 534 TATTGAATTAAACACCCAATTACGAACTTTAGCAACGTCTGACTTTGAAAAAGATTTTTA 593
Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708
||| | ||||||||| | || ||||||||||| ||||| ||| | ||||| | | |
Sbjct 594 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATATT-GAAAAAAGAGTAA 652
Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTTAGT 4760
| | | ||| ||| | ||| ||| ||| || || || | | || |
Sbjct 653 ACGTGAAATTATTAACGCATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTCTCA 712
Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819
|| | | || | |||||||| ||| | |||||| ||| || |||| | | |||
Sbjct 713 TTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAATCCAAC 772
Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879
|| ||| ||| | | | | || ||||| || ||| |||| ||||| ||||||||
Sbjct 773 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 832
Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939
|||| || | || || ||||||||||| || | || ||| ||||| | | | |
Sbjct 833 TATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACCA 889
Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983
| |||||| || || ||||| || |||||||| || ||||||
Sbjct 890 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97795277017286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |