Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq8698 113 9e-21 >seq8698 Length=1311 Score = 113 bits (124), Expect = 9e-21 Identities = 345/524 (66%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 4474 AAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTA-GGTTT--- 4529 ||||| || |||||||| || |||| |||| | |||||| ||| || ||||| Sbjct 418 AAAAAAAAATATGTTATACATTATAGAAATCTTTTGCAATGTG-AGAAATATGGTTTGCG 476 Query 4530 AGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATA 4589 ||| | | ||| | || ||| || ||||| ||||| | ||| | || ||| Sbjct 477 AGTAC---AAAAAGTTCATAGAGTATTAAAATTCAAGCAAAAACCTTGGTTAGAAAAATA 533 Query 4590 TATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTA 4649 ||| || ||| ||| || |||| |||| | | ||| || |||||| | ||||| Sbjct 534 TATTGAATTAAACACCCAATTACGAACTTTAGCAACGTCTGACTTTGAAAAAGATTTTTA 593 Query 4650 TAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAA-AG 4708 ||| | ||||||||| | || ||||||||||| ||||| ||| | ||||| | | | Sbjct 594 TAAGCTGATGAATAATTCTGTATTTGGAAAGACAATGGAAAATATT-GAAAAAAGAGTAA 652 Query 4709 ATATATATTTAAGAACAAAGTGGCAAAGTCA-------ATACAATGTATCG-GATTTAGT 4760 | | | ||| ||| | ||| ||| ||| || || || | | || | Sbjct 653 ACGTGAAATTATTAACGCATTGGGAAAATCATGGAAAAATCAAAGGTGTTGAGAGTCTCA 712 Query 4761 ATG-TAGACCAAACTTCCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAAC 4819 || | | || | |||||||| ||| | |||||| ||| || |||| | | ||| Sbjct 713 TTGCTCGCCCCGAATTCCACAGTCTTTCCATTTTTTCTGAAAATTTGGTCGCAATCCAAC 772 Query 4820 TTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATT 4879 || ||| ||| | | | | || ||||| || ||| |||| ||||| |||||||| Sbjct 773 TTCGCAAAACTAAATTGTTTTATAATAAGCCCATATATTTAGGTTTTAGCATATTAGAGA 832 Query 4880 TATCTAAAATTTATATTTATGACTTTCATTACAATTATGTTATGCAAAATTATGTAAATA 4939 |||| || | || || ||||||||||| || | || ||| ||||| | | | | Sbjct 833 TATCCAAGACTTTAATGTATGACTTTCACTATCAGTA---CATGAAAAATAAATTTACCA 889 Query 4940 CCTCAAAATTATTGTACACTGACACAGATAGTCTAATTTACCAA 4983 | |||||| || || ||||| || |||||||| || |||||| Sbjct 890 ACATAAAATTGTTATATACTGATACTGATAGTCTGATATACCAA 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97795277017286