Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq7375 98.7 1e-15 seq7176 95.1 1e-14 >seq7375 Length=9560 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||||||| || | |||||| || || || |||||||| | |||| ||||| Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798 Query 21560 AACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618 |||||||||||||| ||||| ||| ||||| || || || |||||||| || ||||| || Sbjct 4797 AACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGC 4739 Query 21619 AACTAATCGTTCACCGTATGTAG 21641 || || ||||| || |||||| Sbjct 4738 AATTATACGTTCTCCAAATGTAG 4716 >seq7176 Length=6331 Score = 95.1 bits (104), Expect = 1e-14 Identities = 218/323 (67%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || ||||||||| || ||| ||||| ||||| | ||| | || | |||| || || Sbjct 2577 TCTTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2636 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| | Sbjct 2637 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2696 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 |||||||| | |||| | ||| |||||| | |||||||| || | |||| Sbjct 2697 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2756 Query 132040 TAAAATTGATGGATTTGATAAACT-GTTGACTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | ||| | | |||||||| | || | | |||| | Sbjct 2757 CAAAGTT-AGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACTTGA 2815 Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155 | || ||||| ||| || | ||| | ||| ||| | ||| || || || || | Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTCG 2872 Query 132156 GTTCATTAGGTATACATaaaaaa 132178 || |||||||||| || ||| || Sbjct 2873 GTACATTAGGTATTCACAAACAA 2895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530877163559160