Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq7375 98.7 1e-15
seq7176 95.1 1e-14
>seq7375
Length=9560
Score = 98.7 bits (108), Expect = 1e-15
Identities = 109/143 (76%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559
||||||||| || | |||||| || || || |||||||| | |||| |||||
Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798
Query 21560 AACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGC 21618
|||||||||||||| ||||| ||| ||||| || || || |||||||| || ||||| ||
Sbjct 4797 AACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGC 4739
Query 21619 AACTAATCGTTCACCGTATGTAG 21641
|| || ||||| || ||||||
Sbjct 4738 AATTATACGTTCTCCAAATGTAG 4716
>seq7176
Length=6331
Score = 95.1 bits (104), Expect = 1e-14
Identities = 218/323 (67%), Gaps = 8/323 (2%)
Strand=Plus/Plus
Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919
|| ||||||||| || ||| ||||| ||||| | ||| | || | |||| || ||
Sbjct 2577 TCTTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2636
Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979
| |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| |
Sbjct 2637 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2696
Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039
|||||||| | |||| | ||| |||||| | |||||||| || | ||||
Sbjct 2697 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2756
Query 132040 TAAAATTGATGGATTTGATAAACT-GTTGACTGATGCATTTCCCACAGCAAAAAACTTCA 132098
||| || | |||| | | | | ||| | | |||||||| | || | | |||| |
Sbjct 2757 CAAAGTT-AGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACTTGA 2815
Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155
| || ||||| ||| || | ||| | ||| ||| | ||| || || || || |
Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTCG 2872
Query 132156 GTTCATTAGGTATACATaaaaaa 132178
|| |||||||||| || ||| ||
Sbjct 2873 GTACATTAGGTATTCACAAACAA 2895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530877163559160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |