Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 140 3e-28
seq18220 138 1e-27
seq89413 131 1e-25
seq4562 105 6e-18
seq58137 96.9 3e-15
>seq9095
Length=14658
Score = 140 bits (154), Expect = 3e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| |||||| | ||||| ||| | |||||| | ||||| || ||
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || ||| ||||||| |||||||||||||| ||||| ||||||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTATA 24168
|| |||||||||| | || |||||||| ||||||| | | |||| || ||||
Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCA--GACTATA 4891
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
| || || || || ||||| | ||||||||||| | | ||||| |||
Sbjct 4890 ATATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGGA 4841
Score = 140 bits (154), Expect = 3e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| |||||| | ||||| ||| | |||||| | ||||| || ||
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || ||| ||||||| |||||||||||||| ||||| ||||||
Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5633
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTATA 24168
|| |||||||||| || || |||||||| ||||||| | | |||| || ||||
Sbjct 5632 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCA--GACTATA 5575
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
| || || || || ||||| | |||||||| || | | ||||| |||
Sbjct 5574 ATATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGA 5525
Score = 123 bits (136), Expect = 2e-23
Identities = 157/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || |||||||| |||||||| ||| | || || | ||||| || ||
Sbjct 6664 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 6605
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || ||||| | || || ||||||| ||||| |||||||| ||||| ||||||
Sbjct 6604 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 6545
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTATA 24168
|| |||||||||| || ||| |||||||||||||||| | | |||| || ||||
Sbjct 6544 CAAAGACTGATTTTCGCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCA--GACTATA 6487
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
| || || || || ||||| | || || |||||
Sbjct 6486 ATATCCAGAAGGAGTCTACTTTGCACTTGGTGTT 6453
Score = 102 bits (112), Expect = 7e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||||||||| | ||||| ||| | ||||| | ||||| ||| |
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || ||| ||| ||| || || || || || || || || |||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168
||||| || |||| || || || ||||| |||||| ||| | || ||| || || |
Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCA--GACTACA 5119
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||||| || |||||||| | |||||||| | | ||||||| ||
Sbjct 5118 ACATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5070
Score = 95.1 bits (104), Expect = 1e-14
Identities = 170/245 (69%), Gaps = 5/245 (2%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || ||||| ||| | ||||| ||| | || || | ||||| || ||
Sbjct 4841 AATGCAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 4782
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || || || | || || || ||| ||||| ||||| || ||||| |||||
Sbjct 4781 TGATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 4722
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAAC--GTCAGCGATTAT 24167
||| |||||||||| | || |||||||| ||||||| | | ||||| | |||
Sbjct 4721 ACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAG--ACTAT 4664
Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGA 24227
|| || || ||||||||||| |||| | || | ||| | ||||| || | ||| |
Sbjct 4663 AATATCCAGAAAGAATCTACTCTTCACCTTGTTCTCAGACTTAGAGGTGGTGTGTAAAG- 4605
Query 24228 TTCTT 24232
|||||
Sbjct 4604 TTCTT 4600
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || ||||| ||| | ||||| || | || || | ||||| ||| |
Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || || || | || ||| || ||| || ||||| || || || || |||||
Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 6318
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATA 24168
|| ||||| |||| | || ||||| || ||||||| || | || | ||||| |
Sbjct 6317 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACAC-TATCTGATTACA 6259
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||||| ||||||||||| | || |||| || | ||||||| |||
Sbjct 6258 ACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 6209
>seq18220
Length=5896
Score = 138 bits (152), Expect = 1e-27
Identities = 224/319 (70%), Gaps = 5/319 (2%)
Strand=Plus/Minus
Query 56481 GCTCAAAAATATTTAGATTATAtttttttGATGACATACGATTTTAAAGGCGCTTGGTCG 56540
|||||||| ||| | ||| ||||||| ||||||| ||||| || || || || |||||
Sbjct 5887 GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCA 5828
Query 56541 AATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGTTTAATCCTAAAGAACAC 56600
||| ||| || |||| ||| | |||||||||||||||| ||||| || |||
Sbjct 5827 AATGATACTCTAGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACT 5768
Query 56601 TATACGACCGATTTTGCGGTTCG-TGCTCTGCTTAAACAAAAAGTCGAGAATAAAAAGAT 56659
|| || | || || | || | || |||| || ||| | ||| |||||
Sbjct 5767 TACACATCTGACTTCGGAGTAAAATACT-TGCTGGCGCAGGGAGTGAATCCTAAGAAGAT 5709
Query 56660 TGTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTCGGTGATTTCGTCGACAA 56719
|||||| || || |||||||| ||||| || ||||| || || ||||| | |||||
Sbjct 5708 TGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGTGTTCATGATTACAAAGACAA 5649
Query 56720 AAACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGTACCTGGGAAGACGGAGT 56779
|| ||| || | |||| || | |||||||||||||| || ||| ||||||||||
Sbjct 5648 ---CATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGT 5592
Query 56780 CGTTGATTTTAGAGAAATT 56798
||||| | || || |||
Sbjct 5591 GGTTGACTACAGGGAGATT 5573
>seq89413
Length=986
Score = 131 bits (144), Expect = 1e-25
Identities = 185/260 (71%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 55830 GCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACT 55889
|| || || || || |||||||| |||| ||| || || || || ||| | || |
Sbjct 727 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTATA 786
Query 55890 CCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAAC 55949
|||||||| | ||| | |||||||| || || || || |||||||| |||||||| ||
Sbjct 787 CCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 846
Query 55950 GACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGA 56009
|| ||| | || ||| || ||||| |||| || ||||| || ||| || ||
Sbjct 847 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT 906
Query 56010 GACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAA 56069
|| ||||||||||| || || || || || ||||| || | ||||| || |||||| |
Sbjct 907 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 966
Query 56070 GTGACCGCATGGAACGAACC 56089
|| | |||||||||| ||
Sbjct 967 TTGTCTTCATGGAACGAGCC 986
>seq4562
Length=21325
Score = 105 bits (116), Expect = 6e-18
Identities = 337/515 (65%), Gaps = 11/515 (2%)
Strand=Plus/Minus
Query 132197 AGATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTA 132256
||||| || || |||| || |||| || ||||||||||||| | ||| | |||
Sbjct 20750 AGATGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGAT 20691
Query 132257 GTAAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATG 132316
||||| || || || ||||| |||| || | ||||| || || | || ||||||||
Sbjct 20690 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 20631
Query 132317 TAGGCAATCAATAATGAATTGCGCAGCCCGTGTATGGCCATTTGCCGTTTAAGCTCGTCC 132376
|| ||||||| |||||||||| || ||| | || || | |||||| | ||
Sbjct 20630 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 20571
Query 132377 CAGTTCCACAGATCATTCGATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTA 132436
|||| ||| || || | | ||| | | ||||| |||| |||| | |||
Sbjct 20570 CAGTCCCAAAGGTCTGTAG---GAGTTTTGTCCCACATATCATACTGGAGGATACCTTGG 20514
Query 132437 CTTGCAGGAGATCCGTTATAAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTC 132496
||||| ||| || | ||| | |||||| || | | || || | ||| ||
Sbjct 20513 CTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACT- 20455
Query 132497 TGACTC-AGGGCACCATAATAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTG 132555
| || || ||||||||||||||||| || | |||| | ||| | ||||||
Sbjct 20454 AGCTTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTT 20395
Query 132556 TTGACTGTCGTAGGGCAAATT-TAA--AATAGCGAACGCATCGGCAAGTCCCTGAATGCC 132612
| ||| ||||| | | ||| | | || | | |||||||| || | ||||||| ||
Sbjct 20394 CTCACTTTCGTAAG--ATATTCTCATCAACA-CAAACGCATCTGCCATGCCCTGAACACC 20338
Query 132613 GATACCGATGGGTCTATGTTTAAAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTT 132672
||||| || ||||||||| | | ||| || || ||| || | |||||||| ||
Sbjct 20337 AATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATT 20278
Query 132673 TTTGTCTATTATTTTATTGAGATTGTTAGTGACAA 132707
|| || | ||| || | ||| | ||| ||||
Sbjct 20277 AACATCAATAACTTTGTTTAAATTTTGAGTTACAA 20243
>seq58137
Length=8097
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | ||||| |||||| | || || ||| | ||||| | ||||| || |
Sbjct 7529 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 7588
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
||| || || || | || ||| || ||| ||||| |||||||| ||||| ||
Sbjct 7589 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 7648
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| | |||||| || || |||||| | ||||| | | | | | || ||
Sbjct 7649 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTA 7708
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||||||||||||||| |||| || || ||
Sbjct 7709 CAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 7744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429129278703645
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