Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq27008 145 6e-30 seq9095 111 1e-19 seq89413 102 7e-17 seq21475 102 7e-17 seq58137 95.1 1e-14 seq52194 82.4 6e-11 >seq27008 Length=12848 Score = 145 bits (160), Expect = 6e-30 Identities = 179/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || |||||||| || |||| ||| | || || |||| ||||| Sbjct 4487 TGCGCAGCTTCAGC-GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAA 4429 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| |||||||| || ||||| || || || || ||||||||||| Sbjct 4428 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 4369 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 4368 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 4309 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| | |||||| ||| || || || ||||| || || || || | | ||||| || Sbjct 4308 TGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCG 4249 Query 109498 TG 109499 || Sbjct 4248 TG 4247 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107 || || |||||| |||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 4773 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 4714 Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167 ||| ||| ||| ||| ||||| || || ||||| | | | ||||| ||||| Sbjct 4713 ATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGC 4654 Query 109168 CCGTTC 109173 || ||| Sbjct 4653 CCCTTC 4648 >seq9095 Length=14658 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| |||||| | ||| ||| | Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| ||| ||| || ||||||||| | || |||||| Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| ||| || || ||| | ||||||| || || | || ||||| Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 4889 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || || ||||||||| | ||| | |||||| | | |||| |||| Sbjct 4888 ATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGGAA 4840 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| |||||| | ||| ||| | Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || ||| ||| ||| || ||||||||| | || |||||| Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5633 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| |||| || || || ||| | ||||||| || || | || ||||| Sbjct 5632 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 5573 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || || ||||||||| | ||| | || ||| | | |||| |||| Sbjct 5572 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 5524 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| |||||||| || || ||||| ||||| | ||| ||| | Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || ||| ||||||| ||||| || || | ||| || || Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTATA 115463 || || ||||||| || || |||||| | |||||| ||| | || || | || || | Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CAGACTACA 5119 Query 115464 ACATTCAAAAAGAGTCTACTATACAT 115489 ||||||| || || |||||| ||||| Sbjct 5118 ACATTCAGAAGGAATCTACTTTACAT 5093 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || || || || || || || || || || | ||| ||| | Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || ||| |||||| |||||||| || | ||| ||||| Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 6318 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462 |||||||||||||| ||| || || || |||||||| ||| | || || | ||||| Sbjct 6317 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 6260 Query 115463 AACATTCAAAAAGAGTCTACT 115483 |||||||| ||||| |||||| Sbjct 6259 AACATTCAGAAAGAATCTACT 6239 >seq89413 Length=986 Score = 102 bits (112), Expect = 7e-17 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 32176 TGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTT 32235 ||| || || ||||||||||| || || | || ||||| |||| | || | Sbjct 726 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTAT 785 Query 32236 GCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAA 32295 || ||| | | || || | ||||| |||||||| ||||||||||| ||||| | || Sbjct 786 ACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 845 Query 32296 CGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCG 32355 ||| | ||| ||| |||||||| | || || || || || || | ||||| Sbjct 846 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCG 905 Query 32356 CGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGG 32415 | ||||| || || | || ||||| || ||||| ||| |||||||||| || || || Sbjct 906 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 965 Query 32416 CGTGTCTGCGTGGAACGAACC 32436 ||||| | |||||||| || Sbjct 966 ATTGTCTTCATGGAACGAGCC 986 >seq21475 Length=13715 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| |||| |||| || Sbjct 10895 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 10954 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| | | | | |||||| ||||| ||||| ||||| | || || || Sbjct 10955 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 11014 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || |||||| ||||||||| || || | || || || Sbjct 11015 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 11074 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||| || || || | ||| | ||| | || | || ||||| || Sbjct 11075 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 11125 >seq58137 Length=8097 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/247 (69%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | | |||| | |||||||| || ||||| ||||| || ||||| ||||||||||| Sbjct 7515 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 7574 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || | ||| ||| ||| | | |||||| |||||| || || ||| Sbjct 7575 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 7634 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 ||| | || ||||| ||| | | |||| || || || ||||| ||||| | Sbjct 7635 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGC 7694 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507 ||| | | || || || ||||||||||| |||||| | || |||| ||| | | || Sbjct 7695 ACCCTTTCTGACTACAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 7754 Query 115508 GGAGGAA 115514 || |||| Sbjct 7755 GGTGGAA 7761 >seq52194 Length=4646 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||||||||| || || |||||||| || || | ||| ||| | Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| | | || ||| || ||| ||||| ||||| | || ||||| Sbjct 4057 CGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 3998 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | || || || ||| | ||||||| | ||| || | || || || Sbjct 3997 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 3938 Query 115465 CATTCAAAAAGAGTCTAC 115482 || || |||||||| || Sbjct 3937 TATCCAGAAAGAGTCCAC 3920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424545895019080