Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq27008 145 6e-30
seq9095 111 1e-19
seq89413 102 7e-17
seq21475 102 7e-17
seq58137 95.1 1e-14
seq52194 82.4 6e-11
>seq27008
Length=12848
Score = 145 bits (160), Expect = 6e-30
Identities = 179/242 (74%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317
|||||| ||| || || |||||||| || |||| ||| | || || |||| |||||
Sbjct 4487 TGCGCAGCTTCAGC-GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAA 4429
Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377
|| || || | ||||| |||||||| || ||||| || || || || |||||||||||
Sbjct 4428 GCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 4369
Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437
| || ||||||||| ||||| | ||||||| | | ||||||||| ||||| |||||
Sbjct 4368 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGG 4309
Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497
||| | |||||| ||| || || || ||||| || || || || | | ||||| ||
Sbjct 4308 TGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCG 4249
Query 109498 TG 109499
||
Sbjct 4248 TG 4247
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 109048 GGATTTTATTATTTGGGTCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAAATA 109107
|| || |||||| |||| |||||||| ||||| |||||||||||||| ||||| |||||
Sbjct 4773 GGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 4714
Query 109108 ATGCGTTGGCTTGAGGGTGACGACCCAGCGGTTGACCATAAAAGATTAGCGCCACAGTGT 109167
||| ||| ||| ||| ||||| || || ||||| | | | ||||| |||||
Sbjct 4713 ATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAGTGC 4654
Query 109168 CCGTTC 109173
|| |||
Sbjct 4653 CCCTTC 4648
>seq9095
Length=14658
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| ||||| || || || ||||| |||||| | ||| ||| |
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || ||| ||| ||| || ||||||||| | || ||||||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|||||||| |||| ||| || || ||| | ||||||| || || | || |||||
Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 4889
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|| || || ||||||||| | ||| | |||||| | | |||| ||||
Sbjct 4888 ATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGGAA 4840
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| ||||| || || || ||||| |||||| | ||| ||| |
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || ||| ||| ||| || ||||||||| | || ||||||
Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5633
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|||||||| |||| || || || ||| | ||||||| || || | || |||||
Sbjct 5632 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 5573
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|| || || ||||||||| | ||| | || ||| | | |||| ||||
Sbjct 5572 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 5524
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| |||||||| || || ||||| ||||| | ||| ||| |
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | | || ||| ||||||| ||||| || || | ||| || ||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTATA 115463
|| || ||||||| || || |||||| | |||||| ||| | || || | || || |
Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CAGACTACA 5119
Query 115464 ACATTCAAAAAGAGTCTACTATACAT 115489
||||||| || || |||||| |||||
Sbjct 5118 ACATTCAGAAGGAATCTACTTTACAT 5093
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/201 (71%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||||||||| || || || || || || || || || || | ||| ||| |
Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| || ||| | | || ||| |||||| |||||||| || | ||| |||||
Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 6318
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GAC-AAAACCATGGCCGATTAT 115462
|||||||||||||| ||| || || || |||||||| ||| | || || | |||||
Sbjct 6317 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 6260
Query 115463 AACATTCAAAAAGAGTCTACT 115483
|||||||| ||||| ||||||
Sbjct 6259 AACATTCAGAAAGAATCTACT 6239
>seq89413
Length=986
Score = 102 bits (112), Expect = 7e-17
Identities = 179/261 (69%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 32176 TGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTT 32235
||| || || ||||||||||| || || | || ||||| |||| | || |
Sbjct 726 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTAT 785
Query 32236 GCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAA 32295
|| ||| | | || || | ||||| |||||||| ||||||||||| ||||| | ||
Sbjct 786 ACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 845
Query 32296 CGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCG 32355
||| | ||| ||| |||||||| | || || || || || || | |||||
Sbjct 846 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCG 905
Query 32356 CGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGG 32415
| ||||| || || | || ||||| || ||||| ||| |||||||||| || || ||
Sbjct 906 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 965
Query 32416 CGTGTCTGCGTGGAACGAACC 32436
||||| | |||||||| ||
Sbjct 966 ATTGTCTTCATGGAACGAGCC 986
>seq21475
Length=13715
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||||||||| ||||| || || ||||| |||||||||||| |||| |||| ||
Sbjct 10895 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 10954
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| ||| | | | | |||||| ||||| ||||| ||||| | || || ||
Sbjct 10955 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 11014
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| | | || | ||| || |||||| ||||||||| || || | || || ||
Sbjct 11015 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 11074
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
||||||||| || || || | ||| | ||| | || | || ||||| ||
Sbjct 11075 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 11125
>seq58137
Length=8097
Score = 95.1 bits (104), Expect = 1e-14
Identities = 170/247 (69%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327
||| | | |||| | |||||||| || ||||| ||||| || ||||| |||||||||||
Sbjct 7515 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 7574
Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387
| ||| || | ||| ||| ||| | | |||||| |||||| || || |||
Sbjct 7575 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 7634
Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447
||| | || ||||| ||| | | |||| || || || ||||| ||||| |
Sbjct 7635 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGC 7694
Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507
||| | | || || || ||||||||||| |||||| | || |||| ||| | | ||
Sbjct 7695 ACCCTTTCTGACTACAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 7754
Query 115508 GGAGGAA 115514
|| ||||
Sbjct 7755 GGTGGAA 7761
>seq52194
Length=4646
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||| ||||||||||| || || |||||||| || || | ||| ||| |
Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| | | || ||| || ||| ||||| ||||| | || |||||
Sbjct 4057 CGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 3998
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | ||||| | || || || ||| | ||||||| | ||| || | || || ||
Sbjct 3997 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 3938
Query 115465 CATTCAAAAAGAGTCTAC 115482
|| || |||||||| ||
Sbjct 3937 TATCCAGAAAGAGTCCAC 3920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424545895019080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |