Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 158 1e-33
seq89413 131 2e-25
seq21475 113 4e-20
seq133270 89.7 5e-13
seq9095 87.8 2e-12
seq52194 84.2 2e-11
seq10803 82.4 7e-11
>seq4562
Length=21325
Score = 158 bits (174), Expect = 1e-33
Identities = 447/685 (65%), Gaps = 10/685 (1%)
Strand=Plus/Minus
Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162
|| || || |||||||||||||| || | ||||| || ||||| || || | || ||
Sbjct 20696 TTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 20637
Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222
||||| || | ||||| |||||||||| || || || || | ||| || ||
Sbjct 20636 GGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGG 20577
Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282
| |||| ||||| || || || | ||||||||| || ||||| | || ||
Sbjct 20576 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCT 20517
Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTT--GGCGAGCTCGC 145340
| ||| || || || |||||| | | ||||| ||| || |||| || | || |
Sbjct 20516 TGGCTTGCTGGACTCCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCAGCTAATTCAC 20459
Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400
|||| || || || || || ||||||| || || ||||| ||||| || || |
Sbjct 20458 AACTAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTG 20399
Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460
||| || || ||||| | || | || || ||||| ||||| || | ||||| | |
Sbjct 20398 CTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACAC 20339
Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520
| | || || || | |||| |||| || | | || || |||||| ||
Sbjct 20338 CAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAAT 20279
Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580
|| || |||| ||| || || ||| | ||| | |||||| || | || ||||
Sbjct 20278 TAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTT 20219
Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640
||| | ||| | | ||||| | || | || | || || || || | |
Sbjct 20218 TAAAATTAAATCTGTTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 20165
Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
| || |||||| || || | ||||||| || | ||| | ||| | ||||||||
Sbjct 20164 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTAC 20105
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
|||| || || || ||||||| |||||||| || ||||| || || ||||| || | ||
Sbjct 20104 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACA 20045
Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785
|||| ||| ||||||||||| ||
Sbjct 20044 TGTATGGTGTACCAGTCTCCACTTG 20020
>seq89413
Length=986
Score = 131 bits (144), Expect = 2e-25
Identities = 185/260 (71%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702
|||||||| || || ||||| || ||||| || |||| |||||||| | || |
Sbjct 727 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTATA 786
Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762
|||||| | | || |||||||||||||| | || || |||||||| || || || ||
Sbjct 787 CCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 846
Query 23763 GACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGC 23822
|| | | ||| | ||||||||| | || || ||||| || || |||||
Sbjct 847 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT 906
Query 23823 GCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGA 23882
| |||||||| || || ||||||||||| |||||||| | || || || || || |||
Sbjct 907 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 966
Query 23883 GTGTCGGCGTGGAACGAGCC 23902
|||| | |||||||||||
Sbjct 967 TTGTCTTCATGGAACGAGCC 986
>seq21475
Length=13715
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | || ||||| | ||| | || || ||||||||||||||||| || |
Sbjct 11122 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 11063
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || ||||| || || || || |||| ||||| |||||||| || ||
Sbjct 11062 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 11003
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || |||||| || | | || | |||||| | || ||| |
Sbjct 11002 ATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACC 10943
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| ||||||||| || || || || |||||||| |||||
Sbjct 10942 TCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 10896
>seq133270
Length=334
Score = 89.7 bits (98), Expect = 5e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 131053 ATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGC 131112
|||||||| || || |||||| || || | ||||| || || |||| | ||||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 131113 TGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGT 131171
||||| || |||||||| || |||||||| ||| ||| |||| | | || | |||
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCT-TGAATTTTAGCTTTTACATTTTCAATAGT 120
Query 131172 ATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231
||| | || || | || | ||||| ||| || || ||||| ||||| || ||||||||
Sbjct 121 ATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTG 180
Query 131232 CAT 131234
|||
Sbjct 181 CAT 183
>seq9095
Length=14658
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || ||| || |||||||||| || || ||||| ||||||||||| | ||
Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGT--CTG 5127
Query 131068 ATGGTGCGCG--AGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
|| ||| ||| || || || || || || ||| | || | | ||| ||||| || |
Sbjct 5128 ATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGG 5187
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCG 131184
| || || || || || ||| ||| ||||| | | | || | || || | | |||
Sbjct 5188 GAATCCCCTCCTTATC-TTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCA 5246
Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
| || | |||| |||||||| || || |||||||| ||||| |||||
Sbjct 5247 ACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
>seq52194
Length=4646
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| |||||||| | ||| ||||||||||| |||||||| ||
Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || || || ||||| ||||| || |||| | ||| || || || || ||
Sbjct 4411 AAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 4470
Query 131128 ATTCCTTCTTTGTC 131141
|| || ||||| ||
Sbjct 4471 ATACCCTCTTTATC 4484
>seq10803
Length=5210
Score = 82.4 bits (90), Expect = 7e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 131112 CTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGT 131171
||||||||| || || ||||| ||||| || ||| || ||||| | ||| | |||
Sbjct 3791 CTGCTGGTCTGGGGGAATTCCCTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATAGT 3732
Query 131172 ATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231
|| | || ||| | || | ||| | ||| ||||| ||||| ||||| |||||||||||
Sbjct 3731 GTCCGAGGGCTCAACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTG 3672
Query 131232 CATGA 131236
|||||
Sbjct 3671 CATGA 3667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471104417266560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |