Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq46670 187 2e-42 seq58137 145 5e-30 seq9095 140 2e-28 seq103 140 2e-28 seq52194 111 1e-19 seq4927 109 4e-19 seq133442 95.1 8e-15 seq21475 87.8 1e-12 seq133270 84.2 1e-11 >seq46670 Length=13939 Score = 187 bits (206), Expect = 2e-42 Identities = 127/143 (89%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||||| || ||||||| || | ||||||||||||||||||||||||||||| |||||| Sbjct 4546 ATGGGGTCCGTGAACGTGAACAGGAATGTGGCGGACGCGTTCTACCGCTACAAGATGCCG 4487 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 ||||||||||||||||||||||||||||| ||||| || || || ||||| ||||||||| Sbjct 4486 CGCATCTGCGCCAAGGTCGAGGGTAAGGGGAACGGCATCAAGACTGTCATCGTCAACATG 4427 Query 6282 CCTGAAGTCGCTAAGGCGCTCGG 6304 || || |||||||||||||| || Sbjct 4426 CCGGAGGTCGCTAAGGCGCTTGG 4404 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497 ||||||||||| || || || |||| || ||||| || || ||||| ||||| || ||| Sbjct 1525 TTTATTCGCAAATTCGTCCTCTGTCCCGAGTGCGACAATCCCGAGACGGAGCTAATAGTG 1466 Query 6498 TCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTG 6557 || |||||||| ||||||||||| || |||||||| |||||||| ||||| ||| || Sbjct 1465 TCCACCAAGAGGAACACCATCTCGCAAGGCTGCAAGGCGTGCGGATACCACGGCGCCTTG 1406 Query 6558 GATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601 || || || ||||| || ||||||||||||||||| || || Sbjct 1405 GAATTCAACCATAAACTGAATACCTTCATACTGAAGAACCCGCC 1362 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || ||||| || || || ||||| || |||||||| || ||| |||||| Sbjct 2408 CCCACTAAGTACTTCGGATGTGAGCTCGGCGCCCAAACGCAGTTCGACTTCAAGAACGAG 2349 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424 ||||||||||| ||||| ||| |||| |||||| ||||||| Sbjct 2348 CGCTTCATCGTCAACGGCAGCCATGACTCCGCCAAGTTGCAGGA 2305 >seq58137 Length=8097 Score = 145 bits (160), Expect = 5e-30 Identities = 174/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | |||||| ||||| |||||||| || |||||||||||||| | Sbjct 7763 CATT-CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGT 7705 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| |||| || ||||| ||||| || || || | ||||||||||| | Sbjct 7704 CAGAAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTG 7645 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||| ||||| |||||| || ||||| | | |||||| | || Sbjct 7644 GAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTT 7585 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||||| || ||||| ||||||||||| | |||||||| || |||||||| || Sbjct 7584 CAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530 >seq9095 Length=14658 Score = 140 bits (154), Expect = 2e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||| | ||||||||| ||||| | ||| |||||| || ||||| || | Sbjct 4838 CATT-CCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGT 4896 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | ||||| || | || || | ||| ||||| ||||| || || | ||||||||| | Sbjct 4897 CTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAG 4956 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||||||||||| ||| ||| || ||||| | || || || | || Sbjct 4957 GAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTT 5016 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| ||||||||||| || |||| |||||||| || || ||||| Sbjct 5017 CCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068 Score = 131 bits (144), Expect = 1e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||| | |||||| || ||||| | ||| |||||| || ||||| || | Sbjct 5522 CATT-CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGT 5580 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | ||||| || | || || | ||| ||||| || || || || | ||||||||| | Sbjct 5581 CTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAG 5640 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | ||||||||||||| ||| ||| || ||||| | || || || | || Sbjct 5641 GAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTT 5700 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| ||||||||||| || |||| |||||||| || || ||||| Sbjct 5701 CCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 Score = 122 bits (134), Expect = 6e-23 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||| || | |||| ||| | ||| ||||| ||||||||||| | Sbjct 5978 CATT-CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGT 6036 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | | ||| | || || | || ||||| ||||| || || | ||||||||| | Sbjct 6037 CAGATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTG 6096 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | ||| ||||| ||| ||||| ||| ||||| | | ||||| | || Sbjct 6097 GGGGAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTT 6156 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| ||||| |||||||| || |||| ||||| || ||||| ||||| Sbjct 6157 CCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 6208 Score = 120 bits (132), Expect = 2e-22 Identities = 167/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | |||||||||||| || | ||| |||||| || ||||| || | Sbjct 6434 CATT-CCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGT 6492 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | ||||| || | || || | ||| |||||||| || || || | ||||||||| | Sbjct 6493 CTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTG 6552 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||| ||||| ||| ||| ||| || || | || ||||| | || Sbjct 6553 GAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTT 6612 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | ||||| ||||| || ||||| || || || ||||| ||||| || |||||| Sbjct 6613 CCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 6665 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| ||| | || ||||| | ||| ||||| ||||||||||| |||||| Sbjct 5754 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGAC 5813 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || || | || ||||| ||||| || || | |||||| || | || Sbjct 5814 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 5873 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| || || |||||| ||| ||||| | || || || |||||| Sbjct 5874 ATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 5933 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||| |||||||| || |||| || || || ||||| ||||| Sbjct 5934 TCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 5980 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||| | |||| || || || | ||| |||||||||||||| || |||||| Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | ||| | || |||| ||||| || || || || || | ||||| || | || Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| |||||| ||| ||||| | | ||||| | ||| ||| Sbjct 5418 ATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 5477 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || |||||||| || |||| || || || || || ||||| Sbjct 5478 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||||| || | || | || | ||| || || ||||| ||||||| Sbjct 6206 CATT-CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAAT 6264 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| | || |||| || ||||| ||||| || || | ||| ||||| | Sbjct 6265 CAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 6324 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | || ||||| ||| |||||| || ||||| | | ||||| | | Sbjct 6325 GGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCT 6384 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||| || ||||| || || |||| || || ||||| || ||||| Sbjct 6385 CAACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 6436 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 |||||||||| ||| | || ||||| | ||| ||||| ||||| ||||| || || Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAT 5129 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || || | ||||||||| || || || || | ||||| || | ||| Sbjct 5130 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGA 5189 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || || || ||||||| || ||||| | | || || | |||||| Sbjct 5190 ATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACT 5249 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | |||||||||||||| || | ||||| || || || ||||| Sbjct 5250 TCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296 >seq103 Length=7362 Score = 140 bits (154), Expect = 2e-28 Identities = 77/77 (100%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4892 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 4833 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||||||||||| Sbjct 4832 GGTAATATTTAGCCTTA 4816 Score = 87.8 bits (96), Expect = 1e-12 Identities = 59/66 (89%), Gaps = 5/66 (8%) Strand=Plus/Minus Query 25931 AGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGA 25985 ||||||||||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct 7362 AGATAGTAGATAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 7303 Query 25986 TGACGA 25991 |||||| Sbjct 7302 TGACGA 7297 >seq52194 Length=4646 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||| ||||| || ||||| || | |||| ||| || ||||||||||| |||| Sbjct 3660 TACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAG 3719 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | ||| | || || | || || || || || || || ||||||||||| | || Sbjct 3720 AGAGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGG 3779 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || |||||||| || || || ||||| | | ||| ||| ||||| Sbjct 3780 GAATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAA 3839 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||| |||||||| || || | || || || || |||||||| Sbjct 3840 CTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||| || ||||| || |||||||| || ||||||||| || ||||| || | Sbjct 4349 TACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCG 4408 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || |||| | || || | ||||| |||||||| || || ||||||||||| | || Sbjct 4409 ATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGG 4468 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| || ||| || ||| ||||| | | || || || | Sbjct 4469 GAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTA 4528 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | || ||||| || || || | || || || ||||| ||||| Sbjct 4529 CTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577 >seq4927 Length=3042 Score = 109 bits (120), Expect = 4e-19 Identities = 445/690 (64%), Gaps = 66/690 (10%) Strand=Plus/Minus Query 6811 ACCTGACTGAGAGTACCAAGTCTATGACGTTGAACGAAGACATGGaaaaaaaCCAAAAGC 6870 ||||||| ||| | |||| |||||| || ||| |||| || || ||| | |||| Sbjct 2626 ACCTGACGGAGGGCGCCAAAAGCATGACGCTGTCCGAGGACAGCGAGAAGAACGAGAAGC 2567 Query 6871 AACGTTTGGACCTGTTCTATGTGTACCTCAAGCAGAA-GCACACCTCCGGCGATGTCTCG 6929 | || ||||| ||||||| || ||| |||||| ||| || | |||| ||| | Sbjct 2566 AGCGCATGGACATGTTCTACTCGTTCCTGAAGCAGCGTGCAGACG-CGGGCGCGGTCAC- 2509 Query 6930 GAACACAAAGTCGCTGCGGATCTGTTACACGAGGCTGAACGGTTAAAAGTGAAATCAAAG 6989 |||||| || | | ||||||| ||| | | ||| | || Sbjct 2508 -----------CGCTGCCGACGTACTGAACGAGGCCACACGCCTCGACGTGCGCGCCAAC 2460 Query 6990 GCGCCGCTGGTGCTTTTTGAGGTGCTGGT-GCGTCCGGCCGCGCTGGCGTGCGATGTGCG 7048 ||||| || || || |||||||| || ||| ||| | |||| || ||| ||||| Sbjct 2459 GCGCCCCTTGTCGCCTTCGAGGTGCTAGTCGCG-CCGCGCACGCTCGCCGCCGACGTGCG 2401 Query 7049 CAAGTACCGCGCGCTGTTGCTGCGCTTT--ACGCAACATGACCCGCGCGCGCAACGCGCC 7106 | ||||||| | || ||| | |||| | |||||||| |||| |||||| Sbjct 2400 CCGCCACCGCGCCACTCTCCTCCGCCTCGCACGCGCC--GACCCGCGTGCGCCCCGCGCC 2343 Query 7107 GTTCT-CACTGCGCTTTGTGTGCTCGACACTGCG---------CTGCTGCCCAAAGTGGC 7156 | || ||| ||||| | ||||| | | || ||||| ||||| || | Sbjct 2342 GCCCTGCAC-GCGCTCACCGCGCTCGCCGCCGCCGAACCCGCTCTGCTCCCCAAGCTGCC 2284 Query 7157 CGGCGCGCTTAAACTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTG 7216 || ||| || || ||||| |||||||| || || || | ||| | || |||| || Sbjct 2283 CGCCGCCCTCAAGCTGCTCTACGACCTGGATATCGTGGACGAGCGCGCCGTCCTGGATTG 2224 Query 7217 GTTCCACAAGCCGTCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCC 7275 | | |||||| ||| |||| || | | ||| || ||| |||| ||||||| || | Sbjct 2223 GGCCGCCAAGCCCTCGCGCAAATACGCGCC-CAAGGAGGTGGTGGCCGACGTGCTGCGGC 2165 Query 7276 GCGCGCAGCCCTTCCTGAACTGGCTGCAGCAAGCCGAGGATGAT----------AGCA-- 7323 | |||||||||||||| | ||||||||||| ||||| || || || | Sbjct 2164 GTGCGCAGCCCTTCCTTGAGTGGCTGCAGCAGGCCGACGAGGAGGACTCGGACGAGGATG 2105 Query 7324 GCGACAG---CGCCGAGGA--AC-TGGAGATCGAGTACTCGGACCGCGCGGCGGCGACAC 7377 ||||| | |||||| || || | |||||||||||| |||||||| || | | Sbjct 2104 GCGACGGTGACGCCGACGACGACATCGAGATCGAGTACGACGACCGCGCCAAGGTGGAGC 2045 Query 7378 GCATTAAGGCCG---TGCTGGCGCCGCC---------GCGGCCCA---AAAATGACGACG 7422 ||||||||| | | | |||||||| ||| ||| | | ||||||| Sbjct 2044 CCATTAAGGCGGCAGTCCGCGCGCCGCCCGCCCCCGCGCGCCCCCGTCACGACGACGACG 1985 Query 7423 CAGAGAATGACATAGACATCGACGCCATAT 7452 | || |||| | |||||||||||||||| Sbjct 1984 CTGACGTTGACGTCGACATCGACGCCATAT 1955 >seq133442 Length=317 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||| |||| ||||||||| |||||||||||| | Sbjct 123 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCATCACTGTACTTGTTTGCTATCGGTCTCTC 64 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 63 CCCAATATTTAGCTTTA 47 >seq21475 Length=13715 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 ||||||||||| ||||| |||||||| |||| | || |||| |||||| || ||||| Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | ||||| || || | || | ||||| || || ||||| || ||||| Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 10967 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | |||||| || || || | ||||| ||||||||||| | ||| || ||| Sbjct 10966 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 10907 Query 38307 AATATCTGCAT 38317 || || ||||| Sbjct 10906 AAAATTTGCAT 10896 >seq133270 Length=334 Score = 84.2 bits (92), Expect = 1e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | || || || | ||| || ||||| || ||||| |||| Sbjct 183 TACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 242 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || |||||||| || || ||||| || || ||||||||||| | | Sbjct 243 ATAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAG 302 Query 38209 GGACGCCTTCTTTGTC 38224 | | |||||||||||| Sbjct 303 GAATGCCTTCTTTGTC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334318713342929