Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 154 1e-32
seq21475 134 1e-26
seq52194 116 3e-21
seq133270 105 6e-18
seq58137 105 6e-18
seq35452 95.1 1e-14
>seq9095
Length=14658
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | ||
Sbjct 5525 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 5466
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | ||| | |||| ||| ||||| ||||| ||||| || ||||
Sbjct 5465 TGATACAATAGAAAATGTTAAGGCTAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACC 5407
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| || | ||||| || |||||||| ||||||||| |||||| || || || |
Sbjct 5406 AACAGAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATA 5347
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||| ||||| || | || ||||| || |||||||||| ||
Sbjct 5346 ATATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGGCTAAGAGGTGG 5298
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||||||||| |||| || ||| | |||||| | ||||| ||| | ||
Sbjct 5981 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACACTGGAAGTTGAGCCCTC 5922
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| ||||| | ||| | |||| ||| || || ||||| ||||| || ||||
Sbjct 5921 TGACACAATCGAAAATGTTAAGGCCAAAATTCAA-GATAAGGAAGGAATTCCTCCAGACC 5863
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || |||||||||| || || || | ||||||| ||||| || || ||||
Sbjct 5862 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTGTCTGACTACA 5803
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| || ||||| || |||||||||| || | || ||||| ||
Sbjct 5802 ATATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5754
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||||||||||||||| || |||| || ||| | |||||| | |||||||| | ||
Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||| || || || | ||| |||||| || ||||| || ||||| || || ||
Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCA 6090
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | |||||||||| || || || | ||||||| |||||| | || |||||
Sbjct 6089 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 6030
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||| || ||||| || | ||| | || ||| |||| ||||| ||||
Sbjct 6029 TATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGGAA 5980
Score = 127 bits (140), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || |||| || ||| | || || | |||||||| | |||
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| | || ||||||| | ||| ||||||||||| ||||| |||||
Sbjct 5008 GACACAATCGAA--AATGTTAAAGCAAAGATTCAG-GACAAAGAAGGCATTCCTCCTGAT 4952
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | |||||||| || || ||| | ||||||| ||||| || || ||
Sbjct 4951 CAACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTAT 4892
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || || || || || | ||||||||| | | |||||||| ||||
Sbjct 4891 AATATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGGAA 4840
Score = 118 bits (130), Expect = 9e-22
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || |||| || ||| | || || | |||||||| | |||
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| | || ||||||| | ||| ||||||||||| ||||| |||||
Sbjct 5692 GACACAATCGAA--AATGTTAAAGCAAAGATTCAG-GACAAAGAAGGCATTCCTCCTGAT 5636
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | ||||| || || || ||| | ||||||| ||||| || || ||
Sbjct 5635 CAACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTAT 5576
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| || || || || || | |||||||| | | |||||||| ||||
Sbjct 5575 AATATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 5524
>seq21475
Length=13715
Score = 134 bits (148), Expect = 1e-26
Identities = 176/241 (73%), Gaps = 6/241 (2%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || ||||| | || |||||| |||| || |||| |||||| |
Sbjct 10893 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 10952
Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
||||| ||||| || | || |||| |||||| || || ||||| ||||||||
Sbjct 10953 TCTGATACTAT--AGAAAATGTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACCA 11009
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
||||| || || | || ||||| || |||||| ||||||||| || || || ||
Sbjct 11010 GACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGAC 11069
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232
||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || |||
Sbjct 11070 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTAT 11129
Query 25233 T 25233
|
Sbjct 11130 T 11130
>seq52194
Length=4646
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | || || || ||||||| | || || ||| | ||
Sbjct 3660 ATGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTTGAGCCATCC 3601
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||| || || ||||| || ||||||
Sbjct 3600 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 3541
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || ||||| || || |||| |||||| || ||||| ||
Sbjct 3540 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGATTATAAC 3481
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||||||||| || | |||||||| ||
Sbjct 3480 ATCCAAAAAGAATCTACCTTGCATTTAGTACT 3449
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | ||||| ||| |||||
Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCT 4518
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | || | ||| || ||||| || ||||| || || ||
Sbjct 4517 GACACCATTGAAAATGTAAAGGCTAAGATTCAA-GATAAAGAGGGTATTCCCCCAGATCA 4459
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| |||||||||||||| | ||||||| || || | || |||||
Sbjct 4458 ACAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAA 4399
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || |||||||| ||
Sbjct 4398 CATCCAAAAGGAGTCTACCCTTCATTTAGTACT 4366
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| | || || ||| | |||||| | ||||| || | ||
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || | || |||| || | || |||||||| || ||||| || ||
Sbjct 3828 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGAATTCCCCCAGAT 3772
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | ||||| || ||||| || | || |||| ||| ||| | || |||
Sbjct 3771 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTAC 3712
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| ||||| ||||| | || || || || | || |||||||
Sbjct 3711 AATATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 3662
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || || ||| | || || | ||||| ||| | ||
Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | ||| || || ||||| ||||| || ||
Sbjct 4057 CGACACCATTGA--AAATGTTAAAGCTAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 4001
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || |||| || || || || ||| | ||||||| ||||| || || ||
Sbjct 4000 TCAACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTA 3941
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || ||||| ||||| || || || || || | || |||||||
Sbjct 3940 CAATATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 3890
>seq133270
Length=334
Score = 105 bits (116), Expect = 6e-18
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142
|||||| ||||||||||| ||||| || || ||||| || |||||||||| |||||
Sbjct 327 AAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAACAACGTCTTATTTTTGCGGGCAAG 268
Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202
||||||||||||| ||| || | || ||||| || ||||||||||| || | ||
Sbjct 267 CAATTAGAAGATGGTCGTACACTATCTGACTACAACATCCAAAAAGAATCTACTTTGCAC 208
Query 25203 TTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || | ||||||| ||
Sbjct 207 TTAGTACTTCGTTTAAGAGGTGG 185
>seq58137
Length=8097
Score = 105 bits (116), Expect = 6e-18
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || |||||| |||| || | ||||| || | ||
Sbjct 7532 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 7591
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| ||||| || | || |||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 7592 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 7648
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | ||||| || || || ||||| ||||| | ||||| | || ||
Sbjct 7649 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTA 7708
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
|||||||||||||||||| || || || || ||
Sbjct 7709 CAATATTCAAAAAGAATCTACTCTTCACTTGGT 7741
>seq35452
Length=10678
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/197 (72%), Gaps = 6/197 (3%)
Strand=Plus/Plus
Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149
||| |||||| |||||||| | || || || ||||||||||| || | | || ||
Sbjct 9932 ACCAACATAACCATTAGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 9991
Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208
| | ||| ||| ||| | | | | |||||||| | ||| |||||| ||||||||
Sbjct 9992 AAACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 10050
Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCA 51266
|||| | | |||| |||||||||||||| || | || || |||||| ||||||||
Sbjct 10051 TGCGAAGGAAACCATGCATCTTGCCCTCTTTCACC--AGTTGTATTTGAGCTGAGTTCCA 10108
Query 51267 CAATTCGTCGTGAGTTT 51283
|| || ||||| ||||
Sbjct 10109 TAAGTCATCGTGTGTTT 10125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432514914038585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |