Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq89413 122 9e-23 seq27008 113 5e-20 >seq89413 Length=986 Score = 122 bits (134), Expect = 9e-23 Identities = 183/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 52179 GGATCGTTCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGA 52238 || |||||||| | || | ||||| || ||||| || | || ||||| |||||||| Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927 Query 52239 ATCGTCACCTTAAAGTCCGACCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTG 52298 || | || || |||||| | ||| || ||||| || | |||| ||||||| Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867 Query 52299 TCGATCGGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTAC 52358 |||||| ||| | || || ||||||||||| || ||||| || ||||| |||||||| Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807 Query 52359 AGCAGATGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACG 52418 |||| || | || || || | || | |||||||||| || || | || || Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747 Query 52419 CCCCATTCGACAAAGTAGGC 52438 |||||||| || |||||||| Sbjct 746 CCCCATTCTACGAAGTAGGC 727 >seq27008 Length=12848 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 38443 ACTGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATT 38502 ||||||| || |||||||||| ||| | | | ||||| || || |||| ||| Sbjct 4472 ACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCTACA 4413 Query 38503 CGGGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGC 38562 | ||| || ||| | || || |||| || | |||||| || |||||||||||| Sbjct 4412 CCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGGAGA 4353 Query 38563 CTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGCTCA 38622 | |||| ||||||| |||||||||||||||||||||| ||||||| ||||||| Sbjct 4352 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGCAGC 4293 Query 38623 CCGTCAAAGGCGCCGACTACGTTCA 38647 ||||||||| || ||||| || Sbjct 4292 TGGTCAAAGGCCGAGAGTACGTCCA 4268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536568589361640