Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq7375 161 1e-34
seq76880 143 3e-29
seq28252 136 4e-27
seq89276 134 2e-26
seq39882 129 7e-25
seq6788 127 2e-24
seq26269 118 1e-21
>seq7375
Length=9560
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||||||||| || || || || | ||| |||||||| || | ||||||||||||||||
Sbjct 4839 TCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 4780
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| || || || |||||||| || || || |||||||| || | |||||||| ||||
Sbjct 4779 AAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCTCCAAAT 4720
Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
| || | || |||| |||||| | ||| ||||| || || || ||||||| ||| |||
Sbjct 4719 GTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 4660
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|| ||||| || || || |||| | ||||
Sbjct 4659 AGAGTTTCAATTGCATTGAATAAGAAATC 4631
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| ||
Sbjct 4037 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 3978
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || ||||| || || ||||| || | || || ||||| || || | |||
Sbjct 3977 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 3918
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
|| | || ||||| || |||||||| || |||||||| || || || | |||||| ||
Sbjct 3917 CACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGAT 3858
Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
||||||||||||| |||||| | | ||||||||
Sbjct 3857 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 3822
Score = 125 bits (138), Expect = 8e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649
|| |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| |||
Sbjct 3658 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 3599
Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709
||||||| ||||| ||||| || ||||| ||||||| || | | | || || |||
Sbjct 3598 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCCCTCAACAGGGGTTCAAGT 3539
Query 93710 TGTGGGTCAAAC 93721
||||||||||||
Sbjct 3538 TGTGGGTCAAAC 3527
>seq76880
Length=2446
Score = 143 bits (158), Expect = 3e-29
Identities = 89/94 (95%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGCG 126323
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 2139 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCTCTGGGAGCG 2198
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATT 126357
|||||||||||||||||||||||||| | || ||
Sbjct 2199 TGGGTTCGAACCCCACACCTGACAAACTTTTTTT 2232
>seq28252
Length=18149
Score = 136 bits (150), Expect = 4e-27
Identities = 83/87 (95%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 93 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 34
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 33 GTGGGTTCGAACCCCACACCTGACAAA 7
>seq89276
Length=1825
Score = 134 bits (148), Expect = 2e-26
Identities = 97/109 (89%), Gaps = 5/109 (5%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct 920 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 861
Query 126324 TGGGTTCGAACCCCACACCTGACA-AATTAT--TATTGGAATTTTTGTT 126369
|||||||||||||||||||||||| ||||| | | | |||||||||
Sbjct 860 TGGGTTCGAACCCCACACCTGACATCATTATAGTGTCGTCATTTTTGTT 812
>seq39882
Length=8031
Score = 129 bits (142), Expect = 7e-25
Identities = 82/88 (93%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 5503 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 5562
Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351
|||||||||||||||||||||||| |||
Sbjct 5563 TGGGTTCGAACCCCACACCTGACATATT 5590
>seq6788
Length=8499
Score = 127 bits (140), Expect = 2e-24
Identities = 79/84 (94%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 4318 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 4377
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||||||||||||||||||||
Sbjct 4378 TGGGTTCGAACCCCACACCTGACA 4401
>seq26269
Length=1414
Score = 118 bits (130), Expect = 1e-21
Identities = 79/87 (91%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct 731 GTCAGGTTGGCCGAGTGATCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 672
Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350
|||||||||||||||||| | ||||||
Sbjct 671 TGGGTTCGAACCCCACACATCACAAAT 645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555789128351160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |