Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 127 2e-24
seq58137 122 7e-23
seq52194 120 3e-22
seq89413 118 9e-22
seq133270 107 2e-18
seq21475 102 7e-17
>seq9095
Length=14658
Score = 127 bits (140), Expect = 2e-24
Identities = 158/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA--GTACGAGAATCTT 114231
|||||||||| |||||||| || ||||||||||| | || ||| || || |||||
Sbjct 5088 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGT--CTGATAGTGTGCGTCCATCTT 5145
Query 114232 CAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGG 114291
|||||||||| |||||| | || || | ||||||||| || ||||| || || || ||
Sbjct 5146 CAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTT 5205
Query 114292 CAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350
||| ||||| |||| | | ||||| ||||| | | || || || | || | |||
Sbjct 5206 GAAT-TTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTT 5264
Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || || |||||||||||||| |||||
Sbjct 5265 TTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || | ||| | ||| |||||||| | ||||| || || || || || || ||
Sbjct 5523 ATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCT 5582
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| ||||| || |||||| | || || | ||||| || |||
Sbjct 5583 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGA 5642
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||||||| ||| | | ||| | ||||| | | |||
Sbjct 5643 GGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 5702
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | |||||||| ||||| ||||| |||||||| |||||
Sbjct 5703 ACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || | ||| | ||| |||||||| | ||||| || || || || || || ||
Sbjct 4839 ATTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCT 4898
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| ||||| || ||||| | || || | ||||| || |||
Sbjct 4899 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGA 4958
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||||||| ||| | | ||| | ||||| | | |||
Sbjct 4959 GGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 5018
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | |||||||| ||||| ||||| |||||||| |||||
Sbjct 5019 ACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 122 bits (134), Expect = 7e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || | ||| | || |||||| || | |||||||| |||||||| || || ||
Sbjct 5295 ATCCCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCA 5354
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || |||||| || ||||| |||||| | || || | ||||||||| |||
Sbjct 5355 GACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGA 5414
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| ||||| ||||| ||| ||| | ||| | | ||| | || || | | |||
Sbjct 5415 GGAATACCTTCCTTGTCTTGAAT-TTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTC 5473
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || ||||| || ||||||||||| |||||
Sbjct 5474 CACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || ||||| | ||| || || || | ||||| || || || || || || ||
Sbjct 6435 ATTCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCT 6494
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| ||||| || || ||| | || || | ||||| || |||
Sbjct 6495 GACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGA 6554
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||||| |||| | ||| | || || | | |||
Sbjct 6555 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCC 6614
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | ||||| || || | ||||||||| || || ||||||
Sbjct 6615 ACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 6665
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|||||||| || ||||| ||||| || | ||| || ||||||||| || || |||
Sbjct 6012 GTAGATTCCTTCTGAATATTGTAGTCAGATAGAGTGCGTCCATCTTCAAGCTGCTTTCCA 6071
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | || || | ||||| || || |||||||| ||||| || || ||| | ||
Sbjct 6072 GCAAAAATAAGTCTTTGTTGATCTGGGGGAATGCCCTCTTTATCCTGGAT-TTTCGCCTT 6130
Query 114306 AGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | | ||||| || || | | ||| || |||| || | |||||||| ||||| ||
Sbjct 6131 AACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTGCCAGTCAGTGT 6190
Query 114365 TTTTACAAAAATCTGCAT 114382
||||||||| || |||||
Sbjct 6191 TTTTACAAATATTTGCAT 6208
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
||||| | ||| | || | ||||||||||| || || || || || || |||||
Sbjct 4623 AGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTACGC 4682
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
|||||| ||||| || ||||| | || || | ||||| || |||||||| |||||
Sbjct 4683 CCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCC 4742
Query 114285 TTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343
||||| ||| ||| | ||| | | ||| | || || | | ||| || |||| ||
Sbjct 4743 TTGTCTTGAAT-TTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGT 4801
Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| ||||| || ||||| || ||||| ||||| |||||
Sbjct 4802 GATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCAT 4840
>seq58137
Length=8097
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || || || | ||||||||||||||||| ||||| ||
Sbjct 7762 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCA 7703
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||||| | ||| || |||||| | || | ||| ||||| || |||
Sbjct 7702 GAAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 7643
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||| || ||||| | ||||| || |||| | |||
Sbjct 7642 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7583
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || || || ||||| ||||| ||||||||
Sbjct 7582 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
Score = 96.9 bits (106), Expect = 3e-15
Identities = 93/117 (79%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211
||||||||||| |||| ||| |||||||||| |||||||| |||||||| || |||||
Sbjct 7998 ATACCGCCACGAAGTCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 7939
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTC 114268
| | || ||||| |||||| |||||||| ||||| | || || | |||||| ||
Sbjct 7938 GATAAT-GTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATC 7883
>seq52194
Length=4646
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|||||||| | |||||||||||||| ||||| ||||| || ||| || ||| ||
Sbjct 3452 ACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCC 3511
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
| ||||||||||| ||||||||||||||||||| || |||||||| || |||||
Sbjct 3512 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 3571
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
||||| || | | ||| | ||||||| | || || |||| || | || ||
Sbjct 3572 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTC 3631
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || ||||| || || || ||||||||
Sbjct 3632 CCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
>seq89413
Length=986
Score = 118 bits (130), Expect = 9e-22
Identities = 186/265 (70%), Gaps = 5/265 (2%)
Strand=Plus/Plus
Query 20445 TGCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTACCCGT 20504
||| || || ||||||||||| || |||||||| |||| ||||| || |||| |
Sbjct 726 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTAT 785
Query 20505 TCCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTATCAA 20564
|| ||| | |||| |||| || |||||| | |||||||||||||| || || |||||
Sbjct 786 ACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 845
Query 20565 CGA-CGCGTTAAAGTTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGCGCGG 20623
|| | | |||| || || | |||| ||| | || || || || |
Sbjct 846 TGATAGTTTAAAAGAGATCGAAGGC----AGTTTCCAAGCACTACAGCGGTCCTGTAGCG 901
Query 20624 GCCGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCACAAA 20683
|||| || | || ||||| | || |||||||| ||||| || |||| ||||||||||
Sbjct 902 GCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAA 961
Query 20684 AAGGAGTATCCTCTTGGAACGAACC 20708
||||| | || || |||||||| ||
Sbjct 962 AAGGATTGTCTTCATGGAACGAGCC 986
>seq133270
Length=334
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 114201 ATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGC 114260
|||||||| || || || ||| |||||| | ||| ||||| || |||| ||||||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 114261 TGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTG 114320
|| || || ||||| ||||| |||||||| ||| || ||||| | ||||| ||
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121
Query 114321 TCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 114380
|| | || ||| || |||| ||| | || || || || || ||||| ||||||||||||
Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181
Query 114381 AT 114382
||
Sbjct 182 AT 183
Score = 96.9 bits (106), Expect = 3e-15
Identities = 91/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
||||| || | |||||||||||||| |||||||| || | |||||| ||||||
Sbjct 203 ACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGTGTACGACCATCTTCT 262
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
| ||| || || || | || ||||| ||||| |||||||||||||||||||||||
Sbjct 263 AATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 318
>seq21475
Length=13715
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| || || |||| | || | ||| | || ||||| |||||||||||||| ||
Sbjct 11124 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 11065
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
|| ||||| |||||| |||||||||||||| |||| | ||| || ||||| || |
Sbjct 11064 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 11005
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||| ||||| || || || || ||||| | ||| | || || | || || |
Sbjct 11004 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCA 10945
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || | ||| | ||||| || || || || || || ||||| |||||
Sbjct 10944 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 10896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419346070183908
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