Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq103 152 4e-32
seq9095 93.3 3e-14
seq35452 87.8 1e-12
>seq103
Length=7362
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1247 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 1188
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 1187 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 1150
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1247 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 1188
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 1187 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 1150
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1309 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 1258
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1309 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 1258
>seq9095
Length=14658
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| ||||| || |||| ||| | ||| | || ||||||||| || || || |||| |
Sbjct 4842 CCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 4901
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
||| ||| | || |||| |||||| || ||||| ||||| | || ||||| ||
Sbjct 4902 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGA 4961
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079
| || ||||||||| ||| ||| |||| | || | | |||| || |||
Sbjct 4962 ATGCCTTCTTTGTCCTGAATCTTT-GCTTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 5020
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || ||||| || || |||||||||||||| ||||||||
Sbjct 5021 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| ||||| || |||| || | ||| | || ||||||||| || || || |||| |
Sbjct 5526 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 5585
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
||| ||| | || |||| |||||| || || || ||||| | || ||||| ||
Sbjct 5586 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 5645
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079
| || ||||||||| ||| ||| |||| | || | | |||| || |||
Sbjct 5646 ATGCCTTCTTTGTCCTGAATCTTT-GCTTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 5704
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || || ||||| || || |||||||||||||| ||||||||
Sbjct 5705 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
>seq35452
Length=10678
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886
|| |||||| ||| |||||| | |||||||| || || ||| ||||| |||||||||
Sbjct 10123 ACACACGATGACTTATGGAACTCAGCTCAAATACAACTGGTGAAAGAGGGCAAGATGCAT 10064
Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC- 37945
| | |||||||| ||||||||||| ||||| |||||| | | | || | ||
Sbjct 10063 GGTTTCCTTCGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCA-GTCGCCCGAACA 10005
Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005
|| | || | || ||||| | |||||| | ||||| | ||||| | ||||| ||
Sbjct 10004 GGCTTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTAA 9945
Query 38006 CGGTTACGTCGG 38017
||||| || ||
Sbjct 9944 TGGTTATGTTGG 9933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396317361915118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |