Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq139112 221 4e-53 >seq139112 Length=309 Score = 221 bits (244), Expect = 4e-53 Identities = 230/302 (76%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 41969 ACGAGCGCGAGGAACTGCTCACGCAGGACCGCGGGGTCGTTCGAGCGGGAGAGGAGCTCG 42028 ||||| ||||| | |||||| || || ||||| | || ||||| |||| Sbjct 302 ACGAGTGCGAGCACCTGCTCGCGGAGCTCCGCGCCCGACTGCGGGCGGGGGAGGGCGGAT 243 Query 42029 GCACTGTCGGCCTGCAGGGCGTCGAGCCAGGTCGGGTAGGCGACGGGGCGCTCGTAGACC 42088 || ||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| Sbjct 242 GCGGTGTCGGCCTGCAGCGCGTCGATCCACGTCGGGTAGGCGACGGGGCGGTCGTAGACG 183 Query 42089 GGGCCGTCGACGGCGACCGTGGACGGGTCCACGTCGACGATCCGCTCTCCCTGCCAGTCG 42148 || ||||||| ||||| ||| || || |||| ||||||| | | || |||||| | Sbjct 182 GGACCGTCGATCGCGACGGTGCGTGGATCGACGTTGACGATCTCCACGCCGCGCCAGTTG 123 Query 42149 ATGACGAGACGGCCGTCGCCGGTGACCTCGCCGAGCACGGAGGTCTCCACCTCCCACTTG 42208 |||| ||| ||||| | |||| ||||||||||||||| |||||||| ||||||||| Sbjct 122 ATGATGAGGCGGCCCGTGTCGGTCACCTCGCCGAGCACGCTTGTCTCCACGTCCCACTTG 63 Query 42209 CCGGTGACGGCGAGGAACGCGTCGAGCTTCGCAGGCGAGACGATGGCCATCATCCGCTCC 42268 || || || | ||||||||||||||| | |||| |||| |||||||| |||||| Sbjct 62 TCGACGATCGCCATGAACGCGTCGAGCTTGTCGGGCGTCACGACCGCCATCATGCGCTCC 3 Query 42269 TG 42270 || Sbjct 2 TG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147975366573466