Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq21475 145 2e-29
seq58137 140 8e-28
seq52194 138 3e-27
seq9095 125 2e-23
seq133270 86.0 1e-11
>seq21475
Length=13715
Score = 145 bits (160), Expect = 2e-29
Identities = 178/243 (73%), Gaps = 0/243 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| |||| ||| || ||||| | ||| ||| ||||| || || ||||| |
Sbjct 11122 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 11063
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||||| |||||| || || ||||||| ||| || || |||
Sbjct 11062 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 11003
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| ||||| |||||||| ||||| || |||||||||| ||| | || ||
Sbjct 11002 ATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACC 10943
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAA 288486
||||| || || || || || || || ||||||||||| || |||||| || | | |||
Sbjct 10942 TCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGACTGTAA 10883
Query 288487 TAT 288489
|||
Sbjct 10882 TAT 10880
>seq58137
Length=8097
Score = 140 bits (154), Expect = 8e-28
Identities = 175/239 (73%), Gaps = 6/239 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | | ||| | |||| || ||||||||| ||||| ||||| |
Sbjct 7760 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGA 7701
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
|| |||||||||||||| ||||| ||||| ||||| |||| ||| ||||| ||||
Sbjct 7700 AAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTG---ATCTGG 7644
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || ||||| || || || ||||| ||||| || ||||| |||| |||| | |||
Sbjct 7643 AGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTC 7584
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481
||||| | || || || || || || || || || || || ||||||||| || |||
Sbjct 7583 AACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATAT 7525
>seq52194
Length=4646
Score = 138 bits (152), Expect = 3e-27
Identities = 170/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||||||| || | |||||| | ||| | || |||||||||||| ||||| || |
Sbjct 3433 TCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGA 3492
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| ||||| || || || || ||||| || || ||||| ||||||||||| |||||
Sbjct 3493 CAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTG---GTCTGG 3549
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || || || || || ||||| || || || || ||||| |||| ||| | ||
Sbjct 3550 GGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTC 3609
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct 3610 AACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
>seq9095
Length=14658
Score = 125 bits (138), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| || || || |||| || |||||| |||||||||||||| |
Sbjct 4614 CCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGAC 4673
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
| || || || ||||| | ||| ||||| || || ||||| | ||||| ||||
Sbjct 4674 AATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTG---ATCTGGA 4730
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || ||||| || || || ||||| || || || |||||||| | ||| | |||
Sbjct 4731 GGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 4790
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | ||||| || ||||| ||||| ||||| ||||| || ||||||
Sbjct 4791 ACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841
Score = 125 bits (138), Expect = 2e-23
Identities = 146/196 (74%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||||||||| | || |||||||| ||||||| ||||| || |||||
Sbjct 5333 TTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAA 5392
Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| | |||||| ||| || || ||||| || || || ||||| || || ||
Sbjct 5393 AATCAGCCTCTGTTG---GTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAAC 5449
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
|||||||| | ||| | ||| ||||| | ||||| || ||||| ||||| |||||
Sbjct 5450 ATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTT 5509
Query 288459 GACGAATATCTGCATT 288474
|| || || ||||||
Sbjct 5510 TACAAAAATTTGCATT 5525
Score = 122 bits (134), Expect = 2e-22
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || | ||||| ||||| | || ||| || || ||||| ||||| |
Sbjct 5981 TCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGA 6040
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| ||||| | || ||||| || || || || | |||||| |||||
Sbjct 6041 TAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGA---TCTGG 6097
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || || |||||||||||||||||||| || || ||||| || | ||| | |||
Sbjct 6098 GGGAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTC 6157
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | ||||| || || || ||||| || || || ||||| ||||||
Sbjct 6158 CACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 6209
Score = 122 bits (134), Expect = 2e-22
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || | ||||| || || | || |||||| || || || || || |
Sbjct 6209 TCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGA 6268
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| |||||||| ||||||| || ||||| || || || || | || ||| |||||
Sbjct 6269 TAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGA---TCTGG 6325
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||| ||||||||||| ||||||||||| || ||||| || | ||| | ||
Sbjct 6326 GGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTC 6385
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| | ||||| ||||| || ||||| ||||| ||||| || ||||||
Sbjct 6386 AACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 6437
Score = 105 bits (116), Expect = 2e-17
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||||||||| | | ||||| || ||||| | ||| ||||| |||||
Sbjct 6474 TCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAA 6533
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | ||||| |||| || || ||||| || || || || || || || |||
Sbjct 6534 ATCAGTCTTTGTTG---ATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACG 6590
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | ||| | ||| ||||| | ||||| || ||||| || | ||| ||
Sbjct 6591 TTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTT 6650
Query 288460 ACGAATATCTGCATTATG 288477
||||| || ||||| |||
Sbjct 6651 ACGAAGATTTGCATGATG 6668
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||||||||| | | ||||| || ||||| | ||| ||||| |||||
Sbjct 5562 TCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAA 5621
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | |||||| | || || |||||||| ||||| || || ||||| || |||
Sbjct 5622 ATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTT 5681
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| | || || || || || ||||| || || ||
Sbjct 5682 TCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACA 5741
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 5742 AAAATTTGCAT 5752
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||||||||| | | ||||| || ||||| | ||| ||||| || ||
Sbjct 4878 TCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAA 4937
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | |||||| | || || |||||||| ||||| || || ||||| || |||
Sbjct 4938 ATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTT 4997
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || | ||| ||||| | || || || || || ||||| || || ||
Sbjct 4998 TCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACA 5057
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 5058 AAAATTTGCAT 5068
>seq133270
Length=334
Score = 86.0 bits (94), Expect = 1e-11
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || ||||| | || || || || ||||||||||| || || || ||
Sbjct 220 TTCTTTTTGGATGTTGTAGTCAGATAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAA 279
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|| ||||| |||||| || || |||||||| || |||||||| ||||||
Sbjct 280 AATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTC 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177327414099202
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