Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4562 122 1e-22 >seq4562 Length=21325 Score = 122 bits (134), Expect = 1e-22 Identities = 461/721 (64%), Gaps = 28/721 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | || | || ||||| | ||| |||| || | ||||| || || ||| Sbjct 20702 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 20643 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 114060 || || ||||| || || || | || || || | ||| | ||| ||| | ||| Sbjct 20642 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 20584 Query 114061 CTTGAGGGCGTCCCAGTC----------GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 114110 || ||| | ||||||| |||| ||| |||||| |||||||| Sbjct 20583 TTTAAGGACAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 20534 Query 114111 CAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAA 114170 || ||||||||||||||||| ||||| || | | |||| ||||| || || Sbjct 20533 CATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTT 20474 Query 114171 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 114230 || || ||||| | || || || || || | | ||| || || ||||| || | Sbjct 20473 TTTCAGCTAATTCACAACTAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTT 20414 Query 114231 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 114290 ||| | | || | || || | | | || ||| | ||| |||| | Sbjct 20413 GATTGAGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTG 20354 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350 | | || || ||||| | ||||| || | |||||||||||| || || || Sbjct 20353 CCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAG 20294 Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 || ||||||||||| ||| ||||| | |||| ||||| || |||| |||||||| Sbjct 20293 GGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGA 20234 Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 114470 |||| | | |||| ||| ||| ||| | | |||| ||| || | ||| | Sbjct 20233 TTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACATGTTAAGTG 20180 Query 114471 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 114530 | || || || || || ||||| | ||||| | |||||| | | || || | Sbjct 20179 CTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCTG 20120 Query 114531 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 114590 | || | ||| || ||||| ||||| | || |||||||| |||| ||||||| | Sbjct 20119 TGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAG 20060 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||| || | ||||||||| || || |||||| ||||| | | ||| | ||||| Sbjct 20059 CATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCC 20000 Query 114651 A 114651 | Sbjct 19999 A 19999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596204000463720