Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq18220 149 7e-31
seq52194 123 3e-23
seq9095 109 6e-19
seq31600 102 9e-17
seq21475 98.7 1e-15
seq7010 98.7 1e-15
seq30828 95.1 1e-14
seq30827 91.5 2e-13
seq38911 89.7 6e-13
seq58137 87.8 2e-12
seq101375 86.0 7e-12
seq147150 84.2 2e-11
seq36792 84.2 2e-11
seq100443 82.4 8e-11
>seq18220
Length=5896
Score = 149 bits (164), Expect = 7e-31
Identities = 367/551 (67%), Gaps = 12/551 (2%)
Strand=Plus/Minus
Query 95638 TATTTGGATCATGTGTTTTTAATGAGTTACGACTTTAAAGGCGCATGGTCCAACACGGAT 95697
||| |||||||| | || || |||||||||||||| || || || ||||| || |
Sbjct 5878 TATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAATGATACT 5819
Query 95698 TTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACGACAAGTACACAACT 95757
| || |||||||| ||||||||||| ||| ||||||| || | || | |||||| ||
Sbjct 5818 CTAGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTTACACATCT 5759
Query 95758 GACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTACCTTCCAACAAAATTGTTGTGGGA 95817
|||| | |||||| | |||| ||| ||| | | || || ||||| || ||
Sbjct 5758 GACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGATTGTAGTAGGT 5699
Query 95818 GTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAAAAACAATAACGTATTT 95877
|| || ||||| || | || |||| |||||| || ||||||||| |||| | ||
Sbjct 5698 GTTGCTATGTATGGTCGTGGCTGGACTGGTGTTCATGATTACAAAGACAACATTCCCTTC 5639
Query 95878 ACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGGGAAAACGGTGTCGTCGATTATAGG 95937
|| ||| ||| || || || || ||||| || ||| || |||| || || || || |||
Sbjct 5638 ACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGTTGACTACAGG 5579
Query 95938 CAAGTT---AACGATTTTAAAAACAGTCCAGCTTACACTTACGCTTACGACAAAGTGGCC 95994
| || || || || | || | || | | || | ||||||||| || |||
Sbjct 5578 GAGATTGCGAATGAAATTGCTCA-AGGCAAG-TGGGAGTT-CCATTACGACAATGTCGCC 5522
Query 95995 GAGGCGCCGTACGTTTACGGCGGATCCGACCAGGCGTTGGATCTGATTTCTTACGACGAC 96054
| || || ||||| | | | ||| | | || ||||| | | || || |
Sbjct 5521 CAAGCCCCTTACGTCTTCAGACCATC--AACTGG----AGATCTTGTAACCTATGATAAT 5468
Query 96055 ACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAGAATAATTTAGGTGGTTTGTTT 96114
| || || | | ||||| | || || | | || || |||||||| | |||
Sbjct 5467 GCTAGATCCGTTATTGAAAAAGGTAAATATGTAAGAAATAACAAGCTAGGTGGTCTCTTT 5408
Query 96115 GCATGGGAAATAGATGCCGATAATGGTGATTTGTTAAACGCCATGAACACAGGTCTGGGC 96174
|| |||||| | || |||||||| |||||| | | || |||||||||| ||||| ||
Sbjct 5407 GCTTGGGAAGTGGACGCCGATAACGGTGATCTACTGAATGCCATGAACATGGGTCTCGGT 5348
Query 96175 AACAGCCCTGC 96185
|| || || ||
Sbjct 5347 AATAGTCCGGC 5337
>seq52194
Length=4646
Score = 123 bits (136), Expect = 3e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||||| |||||| || ||||| ||||| ||| ||| || ||||||||||| ||||
Sbjct 3661 ACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 3720
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || |||||||| |||||||| ||||| || || || || | ||
Sbjct 3721 GAGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 3780
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||| ||||| ||| || ||| | | | | ||||| | ||| ||
Sbjct 3781 AATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 3840
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| ||||| || || || |||||||||||||| |||||
Sbjct 3841 TTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
>seq9095
Length=14658
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| ||||||| |||| || || ||||| || |||||||||||||| || |||| |
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| || | || |||||||| || |||||||| || || | ||| ||||| | ||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||| | ||| |||| | || | | | | || || | ||||||
Sbjct 5418 ATACCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 5476
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| | ||||| ||||| || || || ||||||||||| |||||||||
Sbjct 5477 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | || |||||||||||| ||||| || |||||| || ||||| || || | |
Sbjct 6438 CCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 6497
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
| || ||| | || || || ||||| || ||||| || |||| || || || | ||
Sbjct 6498 AATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 6557
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| || ||||||| | ||| | |||| || | | | | || || | ||||||
Sbjct 6558 ATGCCTTCCTTGT-CTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCAC 6616
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||||||||| || |||| || ||||| |||||||||||
Sbjct 6617 TTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664
>seq31600
Length=2932
Score = 102 bits (112), Expect = 9e-17
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 1533 AAAAAGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1474
Query 57058 TCACCACTATACTACCGAGGATTG 57081
| |||||||||||||||| |||||
Sbjct 1473 TTACCACTATACTACCGAAGATTG 1450
>seq21475
Length=13715
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| | | || | ||| | |||||||||| ||||||||||| ||||| ||||
Sbjct 11123 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 11064
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || | || ||||| || |||||||| || || | || |||||||| | |||
Sbjct 11063 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 11004
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||| || |||||| ||| | | | | || || | |||||
Sbjct 11003 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCAC 10944
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||| || |||||||| ||||| || ||||| || || |||||||||
Sbjct 10943 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895
>seq7010
Length=9211
Score = 98.7 bits (108), Expect = 1e-15
Identities = 81/99 (82%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||| | ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 4391 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4332
Query 57058 TCACCACTATACTACCGAGGATTGAATATATAACTTGAA 57096
| |||||||||||||||| ||| || | ||| |||||
Sbjct 4331 TTACCACTATACTACCGAAGATGTAACAAATATGTTGAA 4293
>seq30828
Length=2787
Score = 95.1 bits (104), Expect = 1e-14
Identities = 180/258 (70%), Gaps = 8/258 (3%)
Strand=Plus/Plus
Query 14751 TACAACATTGGTTTATTTTACTATGTACTGTGGAGTATATGCAGTGGCAAGGAGTGGATG 14810
||||||| ||||| ||||| ||||||||||||| |||||| | | || || ||||||
Sbjct 658 TACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTGATCGTAAAGAATGGATG 717
Query 14811 GATAAAAATGTGGCTGCCCAATTC-CTGAA-ATACGTCAA-ACGTCGCATCGAAACCACA 14867
|| |||||| || | ||||| ||| ||| || || ||| |||| |||
Sbjct 718 GACCGAAATGTTGCAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTGCCGAA---ACA 774
Query 14868 ACATGCAAGCTTGGACTCTCGTCTCTTCCCTTGGACCCACAAATGAATACGTCACT-CCT 14926
| |||| | |||| | | || ||||| ||||| || ||| | |||||||| |||
Sbjct 775 AAATGCTATATTGGTTTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTGCCT 834
Query 14927 GACCGCATTATGGTATTGTGTCGACCTCTCATCCGACATATTTAAAAATGACAAAGTTAA 14986
| | || | ||||||||||| || | ||||| ||||||||||| | || || | |
Sbjct 835 G-CAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATAACGCGCA 893
Query 14987 TTACGCCTTTGAACGATT 15004
|||| || ||| ||||
Sbjct 894 TTACTCCAAAGAAAGATT 911
>seq30827
Length=2392
Score = 91.5 bits (100), Expect = 2e-13
Identities = 160/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 14751 TACAACATTGGTTTATTTTACTATGTACTGTGGAGTATATGCAGTGGCAAGGAGTGGATG 14810
||||||| ||||| ||||| ||||||||||||| |||||| | | || || ||||||
Sbjct 296 TACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTGATCGTAAAGAATGGATG 355
Query 14811 GATAAAAATGTGGCTGCCCAATTC-CTGAA-ATACGTCAA-ACGTCGCATCGAAACCACA 14867
|| |||||| | || ||||| ||| ||| || || ||| | ||| |||
Sbjct 356 GACCGAAATGTTGTTGAAAAATTCAAAGAATATATGTTAAGGCGTATTACCGA---GACA 412
Query 14868 ACATGCAAGCTTGGACTCTCGTCTCTTCCCTTGGACCCACAAATGAATACGTCACT-CCT 14926
| |||| | |||| || | || ||||| ||||| || ||| | |||||||| |||
Sbjct 413 AAATGCTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTACCT 472
Query 14927 GACCGCATTATGGTATTGTGTCGACCTCTCATCCGACATATTTAAA 14972
| | || | ||||||||||| || | ||||| | |||||||||
Sbjct 473 G-CAGCTCTCTGGTATTGTGTAGAAATTTCATCATATATATTTAAA 517
>seq38911
Length=4699
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | ||||| ||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 4259 AAAAAATCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 4316
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||| ||
Sbjct 4317 TGACCACTATACTACCGAAGA 4337
>seq58137
Length=8097
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
|||||| ||||| || | || || |||||||||||||| |||| || || || |
Sbjct 7748 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCC 7689
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || | ||||| |||||||| || | || || || || | || | || |||||
Sbjct 7688 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 7629
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|| | ||| |||| | ||| | | | | || ||| | ||| || || | || |
Sbjct 7628 GT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 7570
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
||||||| ||||| || || || |||||||| ||||||||
Sbjct 7569 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
>seq101375
Length=1150
Score = 86.0 bits (94), Expect = 7e-12
Identities = 159/226 (70%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 14751 TACAACATTGGTTTATTTTACTATGTACTGTGGAGTATATGCAGTGGCAAGGAGTGGATG 14810
||||| | ||||| ||||| ||||||||||||| |||||| | | || || ||||||
Sbjct 317 TACAATAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTGATCGTAAAGAATGGATG 376
Query 14811 GATAAAAATGTGGCTGCCCAATTC-CTGAA-ATACGTCAA-ACGTCGCATCGAAACCACA 14867
|| |||||| | | ||||| ||| ||| || || ||| | |||| |||
Sbjct 377 GACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTACCGAA---ACA 433
Query 14868 ACATGCAAGCTTGGACTCTCGTCTCTTCCCTTGGACCCACAAATGAATACGTCACT-CCT 14926
| ||| | |||| || | || ||||| ||||| || ||| | |||||||| |||
Sbjct 434 AAATGTTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAAACGTCACTACCT 493
Query 14927 GACCGCATTATGGTATTGTGTCGACCTCTCATCCGACATATTTAAA 14972
| | || | ||||||||||| || | ||||| |||||||||||
Sbjct 494 G-CAGCTCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAA 538
>seq147150
Length=242
Score = 84.2 bits (92), Expect = 2e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGAA 57083
|||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 1 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGATGGTG 60
Query 57084 TATA 57087
||||
Sbjct 61 TATA 64
>seq36792
Length=1665
Score = 84.2 bits (92), Expect = 2e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Minus
Query 57024 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079
|||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1665 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGAT 1610
>seq100443
Length=576
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| |||| || |||| ||||| |||||||||||||||| ||| ||||| | ||||
Sbjct 283 TCTCCCCGGCGAGGAATCAAACCCCGGTCTCCCGCGTGACATCCGGGGATACTTATCACT 342
Query 57066 ATACTACCGAGGA 57078
|||||||||||||
Sbjct 343 ATACTACCGAGGA 355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542167393756560
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