Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq58137 156 3e-33 seq9095 122 6e-23 seq21475 120 2e-22 seq52194 95.1 9e-15 >seq58137 Length=8097 Score = 156 bits (172), Expect = 3e-33 Identities = 168/221 (76%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || ||||| ||||| |||||||| || ||||| || || | | ||||| Sbjct 7744 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCT 7685 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||| || |||||| | |||||||| ||||| || ||||| ||||||||||| Sbjct 7684 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 7625 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||||| ||||||| |||| ||||||||| | ||| || || || ||||||||| Sbjct 7624 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 7565 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 ||||| || || ||||| ||||| || ||||| ||||| || Sbjct 7564 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGATAT 7525 >seq9095 Length=14658 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 |||||| || | ||||| || ||||| || || || || ||| | | | ||||| Sbjct 5315 AACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTC 5374 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || |||||||||||| | |||| | ||||||||| ||||| ||||||||||| Sbjct 5375 TAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 5434 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| || ||| ||||||| ||||| | ||| || || || || || ||||| Sbjct 5435 AATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTT 5494 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || ||||||||||||||||| Sbjct 5495 CCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524 Score = 109 bits (120), Expect = 4e-19 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--T 15022 || |||||||| | ||||| || || || || || || || ||| ||| ||| | Sbjct 5541 AAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCAT 5598 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | ||| || |||||| | |||| | ||||| || ||||| ||||| |||| Sbjct 5599 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGT 5658 Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 | ||| |||||||| ||| |||| || || || | ||| || ||||||||||| Sbjct 5659 CCTGAATCTTTGCTTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5717 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| |||||||||||||| Sbjct 5718 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | ||| | ||| | ||||| ||||| ||||| || || || || || || Sbjct 4614 CCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTC--TG 4671 Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| ||||| | ||| || ||||| | |||| | ||||| || | Sbjct 4672 ACAATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAG 4731 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||||||||| |||||| || ||| ||||||| ||||| | ||| | Sbjct 4732 GAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 4791 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || || || ||||| || ||||| || ||||| ||||||||||| Sbjct 4792 CTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCAT 4840 Score = 105 bits (116), Expect = 5e-18 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--T 15022 || |||||||| | ||||| || || || || || || || ||| ||| ||| | Sbjct 4857 AACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCAT 4914 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | ||| || ||||| | |||| | ||||| || ||||| ||||| |||| Sbjct 4915 CTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGT 4974 Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 | ||| |||||||| ||| |||| || || || | ||| || ||||||||||| Sbjct 4975 CCTGAATCTTTGCTTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5033 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| |||||||||||||| Sbjct 5034 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||||||| | ||||| || || || |||||||| || || Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTC--TG 5127 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || | ||||| | |||||| |||||| | || | | ||||||||| | Sbjct 5128 ATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGG 5187 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || ||||| || |||||| ||| ||| |||| || || || | || | Sbjct 5188 GAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAA 5247 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||||| |||||||| || || |||||||||||||||||||| Sbjct 5248 CTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--TCTTCTAATTGTTTGC 15037 ||||| || || || || || || || ||| ||| ||| ||||| | ||| || | Sbjct 6468 GTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCATCTTCGAGTTGCTTTC 6525 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTT 15096 | ||| | |||| | ||||| || ||||| ||||||||||| ||| ||||| Sbjct 6526 CGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGC-C 6584 Query 15097 TTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGA 15156 ||||| |||| || ||||| | ||| || || || || |||||||| || || | | Sbjct 6585 TTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAA 6644 Query 15157 GTTTTTACAAAAATTTGCAT 15176 |||||||| || |||||||| Sbjct 6645 GTTTTTACGAAGATTTGCAT 6664 >seq21475 Length=13715 Score = 120 bits (132), Expect = 2e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037 || || || ||||| |||||||| || || ||| || | ||||||| |||||| | Sbjct 11092 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGTTGTTTAC 11035 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 |||| | |||||||| || ||||| |||||| |||||||| || ||||| || Sbjct 11034 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTT 10975 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 ||||| ||||||||||||| || || || | ||||||||||||||| || || | Sbjct 10974 TTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 10915 Query 15158 TTTTTACAAAAATTTGCAT 15176 | || || ||||||||||| Sbjct 10914 TCTTGACGAAAATTTGCAT 10896 >seq52194 Length=4646 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||||||| | |||||| |||||||| ||||| ||||| ||| | | | || || Sbjct 3452 ACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCC 3511 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || ||||| ||||| | || | |||||||||||| ||||| || |||||||| Sbjct 3512 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 3571 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| |||| ||||| ||| || || || || || ||||| || Sbjct 3572 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTC 3631 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || |||||| Sbjct 3632 CCAGTAAGAGTCTTAACGAAGATCTGCATA 3661 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || ||||| || || ||||| || || | | | ||||| Sbjct 3908 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 3967 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || |||||| | || | ||| ||||| || |||||||||||||| || | Sbjct 3968 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 4027 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| |||| || || ||| ||||| || || || || ||||| Sbjct 4028 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTT 4087 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| ||||| |||||||| Sbjct 4088 CCAGTAAGTGTTTTGACAAATATTTGCAT 4116 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCT 15008 |||||||||| | | ||||||||||||||||| || ||||| |||||||| | || | Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | ||||| | |||||||| || | || | ||| ||||| || || Sbjct 4411 AAG-GTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 4469 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| || || || || ||| || |||||| |||| || || || ||||| Sbjct 4470 AATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTAC 4529 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || || || ||||| || || || ||||| ||||||||| Sbjct 4530 TTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 4578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356721398474315