Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 156 3e-33
seq9095 122 6e-23
seq21475 120 2e-22
seq52194 95.1 9e-15
>seq58137
Length=8097
Score = 156 bits (172), Expect = 3e-33
Identities = 168/221 (76%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || || ||||| ||||| |||||||| || ||||| || || | | |||||
Sbjct 7744 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCT 7685
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| ||||| || |||||| | |||||||| ||||| || ||||| |||||||||||
Sbjct 7684 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 7625
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||||||| ||||||| |||| ||||||||| | ||| || || || |||||||||
Sbjct 7624 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 7565
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185
||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 7564 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGATAT 7525
>seq9095
Length=14658
Score = 122 bits (134), Expect = 6e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
|||||| || | ||||| || ||||| || || || || ||| | | | |||||
Sbjct 5315 AACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTC 5374
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
|| |||||||||||| | |||| | ||||||||| ||||| |||||||||||
Sbjct 5375 TAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 5434
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
|||||| || ||| ||||||| ||||| | ||| || || || || || |||||
Sbjct 5435 AATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTT 5494
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| ||||| || |||||||||||||||||
Sbjct 5495 CCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524
Score = 109 bits (120), Expect = 4e-19
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--T 15022
|| |||||||| | ||||| || || || || || || || ||| ||| ||| |
Sbjct 5541 AAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCAT 5598
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | ||| || |||||| | |||| | ||||| || ||||| ||||| ||||
Sbjct 5599 CTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGT 5658
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| ||| |||||||| ||| |||| || || || | ||| || |||||||||||
Sbjct 5659 CCTGAATCTTTGCTTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5717
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||| ||||| ||||||||||||||
Sbjct 5718 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | ||| | ||| | ||||| ||||| ||||| || || || || || ||
Sbjct 4614 CCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTC--TG 4671
Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| ||||| | ||| || ||||| | |||| | ||||| || |
Sbjct 4672 ACAATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAG 4731
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||||||||| |||||| || ||| ||||||| ||||| | ||| |
Sbjct 4732 GAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 4791
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || || || || ||||| || ||||| || ||||| |||||||||||
Sbjct 4792 CTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCAT 4840
Score = 105 bits (116), Expect = 5e-18
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--T 15022
|| |||||||| | ||||| || || || || || || || ||| ||| ||| |
Sbjct 4857 AACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCAT 4914
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | ||| || ||||| | |||| | ||||| || ||||| ||||| ||||
Sbjct 4915 CTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGT 4974
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| ||| |||||||| ||| |||| || || || | ||| || |||||||||||
Sbjct 4975 CCTGAATCTTTGCTTTA-ACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5033
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||| ||||| ||||||||||||||
Sbjct 5034 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | |||||||| | ||||| || || || |||||||| || ||
Sbjct 5070 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTC--TG 5127
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| | | || | ||||| | |||||| |||||| | || | | ||||||||| |
Sbjct 5128 ATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGG 5187
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| || ||||| || |||||| ||| ||| |||| || || || | || |
Sbjct 5188 GAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAA 5247
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | ||||| |||||||| || || ||||||||||||||||||||
Sbjct 5248 CTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG--TCTTCTAATTGTTTGC 15037
||||| || || || || || || || ||| ||| ||| ||||| | ||| || |
Sbjct 6468 GTAGACTCCTTCTGGATATTATAGTC--TGACAATGTGCGCCCATCTTCGAGTTGCTTTC 6525
Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTT 15096
| ||| | |||| | ||||| || ||||| ||||||||||| ||| |||||
Sbjct 6526 CGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGC-C 6584
Query 15097 TTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGA 15156
||||| |||| || ||||| | ||| || || || || |||||||| || || | |
Sbjct 6585 TTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAA 6644
Query 15157 GTTTTTACAAAAATTTGCAT 15176
|||||||| || ||||||||
Sbjct 6645 GTTTTTACGAAGATTTGCAT 6664
>seq21475
Length=13715
Score = 120 bits (132), Expect = 2e-22
Identities = 147/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037
|| || || ||||| |||||||| || || ||| || | ||||||| |||||| |
Sbjct 11092 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGTTGTTTAC 11035
Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097
|||| | |||||||| || ||||| |||||| |||||||| || ||||| ||
Sbjct 11034 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTT 10975
Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157
||||| ||||||||||||| || || || | ||||||||||||||| || || |
Sbjct 10974 TTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 10915
Query 15158 TTTTTACAAAAATTTGCAT 15176
| || || |||||||||||
Sbjct 10914 TCTTGACGAAAATTTGCAT 10896
>seq52194
Length=4646
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||||||| | |||||| |||||||| ||||| ||||| ||| | | | || ||
Sbjct 3452 ACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCC 3511
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| ||||| ||||| | || | |||||||||||| ||||| || ||||||||
Sbjct 3512 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 3571
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || || ||| |||| ||||| ||| || || || || || ||||| ||
Sbjct 3572 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTC 3631
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| || || || || ||||||
Sbjct 3632 CCAGTAAGAGTCTTAACGAAGATCTGCATA 3661
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||||||| || ||||| || || ||||| || || | | | |||||
Sbjct 3908 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 3967
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||| || |||||| | || | ||| ||||| || |||||||||||||| || |
Sbjct 3968 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 4027
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| |||| || || ||| ||||| || || || || |||||
Sbjct 4028 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTT 4087
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| ||||| ||||||||
Sbjct 4088 CCAGTAAGTGTTTTGACAAATATTTGCAT 4116
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCT 15008
|||||||||| | | ||||||||||||||||| || ||||| |||||||| | || |
Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | ||||| | |||||||| || | || | ||| ||||| || ||
Sbjct 4411 AAG-GTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGG 4469
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||| || || || || ||| || |||||| |||| || || || |||||
Sbjct 4470 AATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTAC 4529
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || || || || ||||| || || || ||||| |||||||||
Sbjct 4530 TTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 4578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356721398474315
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