Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 111 1e-19
seq58137 109 5e-19
seq52194 96.9 3e-15
>seq9095
Length=14658
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| |||| ||||||||||| || | |||||||| || || ||||| || ||
Sbjct 6437 TCCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGA 6496
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || || || ||||| ||| | |||| || || ||||| |||||
Sbjct 6497 CAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 6556
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||| ||||||| | ||| | | || ||| | | ||||| || || | | || |
Sbjct 6557 AATGCCTTCCTTGT-CTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 6615
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| | || | ||||| || || | ||||||||| || || ||||||
Sbjct 6616 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 6665
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | || |||| || || || | ||||| || ||||||||||| || || |
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| ||||||||||| |||||| | |||| | ||| || || |||||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || |||||||| ||||| ||| | | ||| | || || | | || |||
Sbjct 5418 ATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 5477
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || ||||| || ||||||||||| |||||
Sbjct 5478 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | ||||| || || ||||||||||| || | ||||| ||| ||
Sbjct 6000 ACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGAGTGCGTCCATCTTCA 6059
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| |||||||| | || | || || ||||| || || |||||||| || ||| |
Sbjct 6060 AGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGAATGCCCTCTTTATCCTGG 6119
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|||||| ||| | | ||| | || || | | || ||||| | || | ||||||
Sbjct 6120 ATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTG 6179
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| ||||||||||| || |||||
Sbjct 6180 CCAGTCAGTGTTTTTACAAATATTTGCAT 6208
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||||| ||||| || || ||||| ||||| || | ||||| ||| ||
Sbjct 5088 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCA 5147
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| |||||||||||| | || | | ||| || || || || || |||||||| | | ||
Sbjct 5148 AGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTAT-CTTG 5206
Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| ||| || | | ||| | ||||| | | ||| ||||| | || | |||||
Sbjct 5207 AATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTT 5266
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || |||||||||||||| |||||
Sbjct 5267 ACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||||| ||||| || || ||||||||||| || || ||||| ||| ||
Sbjct 5772 ACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCA 5831
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| |||||||| | || | | || || || ||||| || || ||||| ||
Sbjct 5832 AGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGA 5891
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
||||| ||| | | ||||| ||||| | ||| ||||| | || | ||||||
Sbjct 5892 ATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTG 5951
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || |||||||| || |||||
Sbjct 5952 CCAGTCAGTGTCTTTACAAATATTTGCAT 5980
>seq58137
Length=8097
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||||| ||||| || | ||||| ||||||||||||||||| ||
Sbjct 7760 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGA 7701
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||||| || || | || ||||||||| | ||||| || || ||||| |||||
Sbjct 7700 AAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 7641
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||| ||||||| | ||| ||| || || | | ||| | || || | | || |
Sbjct 7640 AATGCCTTCCTTGT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 7582
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | ||||| || || || ||||| ||||| ||||||||
Sbjct 7581 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
>seq52194
Length=4646
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||||||||| | || | || ||||| | ||||| |||||||| || || |||||
Sbjct 3433 TCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGA 3492
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || | |||||| ||||| |||| | ||||| || || || ||
Sbjct 3493 CAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 3552
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||| ||| || ||| | | ||||| ||||| | ||| ||
Sbjct 3553 AATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAAC 3612
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || || ||||| || || || ||||||||
Sbjct 3613 CTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || ||||| || || ||||| || | || |||||||| ||||||||||| ||
Sbjct 3662 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 3721
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || ||||| || |||||| | || | || || ||||| || ||
Sbjct 3722 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 3781
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||| ||||| ||| || || | | ||| | ||||| | || |||
Sbjct 3782 ATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 3841
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || || || || |||||||| ||||||||
Sbjct 3842 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474585704654160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |