Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4562 118 1e-21 >seq4562 Length=21325 Score = 118 bits (130), Expect = 1e-21 Identities = 255/380 (67%), Gaps = 6/380 (2%) Strand=Plus/Minus Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 ||| | ||| |||| || | || || ||||| | ||||| || | |||||||||||| Sbjct 20370 CAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATT 20311 Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354 || || || || ||||||||||| ||| ||||| | |||| ||||| Sbjct 20310 TGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTG 20251 Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 || |||| |||||||||||| | | |||| ||| ||| ||| | | |||| Sbjct 20250 AGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA-- 20196 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 ||| || | ||| || || || || || || ||||| | ||||| | ||| Sbjct 20195 -ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGT 20137 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 ||| | | || || || || | ||| || ||||| ||||| | || |||||||| Sbjct 20136 GTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATT 20077 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 |||| ||||||| |||||||| || | ||| ||||| || || |||||| ||||| Sbjct 20076 ACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGC 20017 Query 116595 CTTGAGAATAGCCTTCCATA 116614 | | ||| | |||||||| Sbjct 20016 TTCTATAATTGACTTCCATA 19997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612326513062440