Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4562 113 6e-20 >seq4562 Length=21325 Score = 113 bits (124), Expect = 6e-20 Identities = 463/725 (64%), Gaps = 34/725 (5%) Strand=Plus/Plus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 ||||||||||||||||| ||| | || || || || |||||| ||||||||||||||| Sbjct 20026 GAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAA 20085 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 ||| | || || || || ||| || || ||||| | || ||| || || Sbjct 20086 AATCTTGGCACTATTAAATGTAGCAATCTTTGCACAGAGGTTGTGCAATACACTTCAGAA 20145 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 ||||| ||| ||||| ||||| || || || || || || || ||| || Sbjct 20146 GATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAA 20199 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | || | |||| ||| | ||||| | | ||| | || || | ||| || |||| || Sbjct 20200 AATAACAGATTTAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTA 20259 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATG 112601 |||| |||||||||| |||||||| || || ||| || | || |||||| Sbjct 20260 AACAAAGTTATTGATGTTAATTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATG 20316 Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGC 112661 ||||| | || |||||| | ||||| || || | || |||| || | ||| | Sbjct 20317 AGACATAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATGCGTT-----TGTGTTGA 20371 Query 112662 CACGCATTTGATTCCGACGAAGCGAAGGAAA------TCAATGCGCGTATATTTGAGACA 112715 | || | || ||| | ||| | || ||||| | |||||||| || Sbjct 20372 TGAGAATAT-CTTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACT 20430 Query 112716 ATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAA 112775 || ||| | | || || || || |||| || || || || || ||| |||| Sbjct 20431 ATTTATTATGGTGCACTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGC 20490 Query 112776 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGT 112832 || | | | || |||||| ||||| | || || | ||||||||||| || | Sbjct 20491 ACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACT 20550 Query 112833 GAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTC 112890 || | ||| | ||||||| | || || ||| || ||| | | ||| Sbjct 20551 CCTACAGACCTT---TGGGACTGGGCTGTCCTTAAAGAAAAGATAGCAA--AACATGGTT 20605 Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950 | || || ||| ||||| || || ||||| || ||||| || |||||||| | || | Sbjct 20606 TGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCCTCTACTGCACAAATTCTTGGCA 20665 Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAG 113010 | | ||||| |||||||||| || | || || || | |||||| | | | |||| Sbjct 20666 ACACTGAATCTTTTGAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTATCTGGAG 20725 Query 113011 AGttt 113015 | ||| Sbjct 20726 AATTT 20730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619547789010480