Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4562 161 1e-34 >seq4562 Length=21325 Score = 161 bits (178), Expect = 1e-34 Identities = 489/747 (65%), Gaps = 24/747 (3%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || |||||||||| |||| Sbjct 20730 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 20671 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | || || | |||||||| || ||||| || ||||| || || ||||| ||| || Sbjct 20670 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 20611 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084 || | ||| | || ||| || ||| || || ||| ||||||| | || | Sbjct 20610 GCGCAAACCATGTT--TTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCT 20556 Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || | || ||||||||||| | || || | |||||| | ||| || | | Sbjct 20555 GTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGA 20496 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | ||||| |||||| |||||||| || || || || | | | | Sbjct 20495 TATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCACCATAA 20436 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | || Sbjct 20435 TAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TAT 20377 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | ||| |||| || | || |||||||| | |||||||||||| |||| Sbjct 20376 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCT 20317 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || ||||||||||| ||||| ||| ||| Sbjct 20316 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTT 20260 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | ||||| | ||| ||| || | Sbjct 20259 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TT 20203 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| || | ||| || || || || | ||||| || ||| ||||| Sbjct 20202 ATTTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 20146 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || ||||| || | ||| || ||||| || || | ||| Sbjct 20145 TTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 20086 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| ||||||||| |||| || |||||||| || | |||||| || || || ||||| Sbjct 20085 TTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 20026 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCA 106644 | || | | | ||||| |||||| Sbjct 20025 CACTTGGGCTTCTATAATTGACTTCCA 19999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588845389325160