Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq9095 163 6e-35 seq52194 154 3e-32 seq58137 149 1e-30 seq133270 122 2e-22 >seq9095 Length=14658 Score = 163 bits (180), Expect = 6e-35 Identities = 170/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | ||||||||||||||| || ||||| || ||||| || || | | || Sbjct 4619 TCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGT 4678 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| || ||||| || || || || |||| |||||| ||||||||||| || Sbjct 4679 ACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACC 4738 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| || || || || || || ||| ||||||||| | Sbjct 4739 TTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAA 4798 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || |||| || |||||||| | ||||||| Sbjct 4799 AGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | ||| ||||| || || ||||| || || | | || | |||||| Sbjct 6452 CAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATC 6511 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 |||||| ||||| || ||||| || |||| |||||| ||||||||||||||||| ||||| Sbjct 6512 TTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTC 6571 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||| ||| ||| ||||| || || || || ||| ||||||||| | || | || Sbjct 6572 TTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGT 6631 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||||||||| | |||||| Sbjct 6632 TTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664 Score = 145 bits (160), Expect = 2e-29 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||| | ||| | ||| || || ||||||||||| || || | ||||| Sbjct 5303 TCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGT 5362 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || ||||| || || | ||||||||||||||||| || Sbjct 5363 GCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACC 5422 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| || || || || || || ||| ||||||||| | Sbjct 5423 TTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAA 5482 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || |||| || ||||| || | ||||||| Sbjct 5483 AGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || | ||| || || || ||||||||||| || | ||||| | |||||||| Sbjct 6000 ACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGAGTGCGTCCATCTTCA 6059 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || ||||||| |||||| ||||| |||||||| ||||| || || Sbjct 6060 AGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGAATGCCCTCTTTATCCTGG 6119 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| || || ||||| || || ||| ||||||||| | || | || || Sbjct 6120 ATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTG 6179 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||| |||||||| || | ||||||| Sbjct 6180 CCAGTCAGTGTTTTTACAAATATTTGCATT 6209 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | || | ||| ||||| || || ||||| || || | | || Sbjct 5531 TCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGT 5590 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| || ||||| || ||||| || |||| |||||| || ||||||||||| Sbjct 5591 GCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCC 5650 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| ||||| ||| || || || || || ||||| ||| ||||||||| | Sbjct 5651 TTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAA 5710 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || |||| ||||| || || | |||||| Sbjct 5711 GGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | || | ||| ||||| || || ||||| || || | | || Sbjct 4847 TCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGT 4906 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| || ||||| || || || || |||| |||||| || ||||||||||| Sbjct 4907 GCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCC 4966 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| ||||| ||| || || || || || ||||| ||| ||||||||| | Sbjct 4967 TTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAA 5026 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || || |||| ||||| || || | |||||| Sbjct 5027 GGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || || ||||||||||| || | || || | |||||||| |||||||| || Sbjct 5783 AGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCAAGCTGCTTTCC 5842 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || || ||||| | |||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 5843 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTT 5902 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || || ||||| || || ||||| || || | || || || |||| || Sbjct 5903 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTCAGTGT 5962 Query 195123 TTTTACGAACACTTGCATT 195141 ||||| || | ||||||| Sbjct 5963 CTTTACAAATATTTGCATT 5981 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || || ||||| ||||| || | || || | |||||||| || || || || Sbjct 5099 AGTAGATTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCAAGTTGTTTTCC 5158 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||||| ||||| | ||||||||||| ||||| || || || |||||||||||| || Sbjct 5159 AGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTT 5218 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || ||||| ||||| ||| || |||||||| |||| || || || || | || Sbjct 5219 AACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGCGT 5278 Query 195123 TTTTACGAACACTTGCAT 195140 |||||| || | |||||| Sbjct 5279 TTTTACAAAAATTTGCAT 5296 >seq52194 Length=4646 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || |||||||| || | || || | |||||||| || || Sbjct 3913 GTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 3972 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || Sbjct 3973 CTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTT 4032 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || ||||||||||| || || ||||| | || | || ||||| || Sbjct 4033 AGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTTCCAGT 4092 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| || || | ||||||| Sbjct 4093 AAGTGTTTTGACAAATATTTGCATT 4117 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||| | |||||||||||| ||||||||||| || | ||||| | ||||| Sbjct 3677 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCC 3736 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || |||||||| || ||||| || || |||||||| ||||| ||||| || ||||||||| Sbjct 3737 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCT 3796 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || || || || ||||| ||||| || ||| ||||| | || | || Sbjct 3797 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 3856 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| | || ||||| || | ||||| Sbjct 3857 TTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||| ||||| || ||||| || | | || | |||||||| ||||| Sbjct 4375 TGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCTTCCAGCTGT 4434 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || |||||||| |||||||| ||||| ||||| || ||||| |||||||| || Sbjct 4435 TTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTA 4494 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||||||||| || || ||||| || || | ||||| ||||| Sbjct 4495 GCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGAGTTATAGTCTTGCCTGTT 4554 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 4555 AGTGTCTTGACAAATATTTGCAT 4577 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || |||||||| || || ||||| | ||||| | ||||| || | ||| ||||| Sbjct 3464 GTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCA 3523 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| || || ||||||||||| |||||||| || |||||||| || || ||| Sbjct 3524 GCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTA 3583 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || ||||| || || || || | || | ||||| || || | ||| Sbjct 3584 ACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTC 3643 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 3644 TTAACGAAGATCTGCAT 3660 >seq58137 Length=8097 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||||||||| || ||||||||||||||||| || | ||| || | || || Sbjct 7745 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTC 7686 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||| || ||||| || | |||||||| ||||||||||||||||| ||||| Sbjct 7685 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7626 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| || || || ||||| || || ||| ||| ||||| | |||| || Sbjct 7625 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7566 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || || | ||||| || || | ||||||| Sbjct 7565 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTT 7531 >seq133270 Length=334 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 194959 ATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGT 195018 || ||||| || | || || | |||||||| | |||||||| || |||||||| || Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61 Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || || || ||||| ||||| ||||||||||||||||| || || || ||||| || Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 || || ||||||||| ||||||| |||||||| || | ||||| || || | ||| Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181 Query 195139 AT 195140 || Sbjct 182 AT 183 Score = 104 bits (114), Expect = 5e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||| || |||||||| || ||||| || | || || | |||||||| | || Sbjct 208 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGATAGTGTACGACCATCTTCTAATTG 267 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || ||||| |||||||| || ||||||||||||||||||||||| ||||| Sbjct 268 CTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATTTT 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107293036942553