Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 102 5e-17
seq21475 102 5e-17
seq52194 100 2e-16
seq89413 95.1 8e-15
seq9095 89.7 3e-13
>seq58137
Length=8097
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| || |||||| ||||| || ||||| |||||| | ||| | ||
Sbjct 7745 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTC 7686
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||| || ||||| || || || | ||||| || ||| | || | || ||||||||
Sbjct 7685 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7626
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||| || ||| || | | || | || | ||||| || | || |||||
Sbjct 7625 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7566
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| ||||| || || ||||||||||||||||| ||
Sbjct 7565 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
>seq21475
Length=13715
Score = 102 bits (112), Expect = 5e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
|||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || |
Sbjct 11103 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 11044
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
| ||||| || ||||| || | |||||||||||| | || | || ||||| || |
Sbjct 11043 GTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGA 10984
Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
| || ||| || | |||| | ||| |||||| || |||| ||| |||||||| |
Sbjct 10983 TTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTAC 10924
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| || ||||| || || || |||||
Sbjct 10923 CCGTAAGGGTCTTGACGAAAATTTGCAT 10896
>seq52194
Length=4646
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| |||||||| | ||| ||||||||||| || ||||| || || | || ||||
Sbjct 3677 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCC 3736
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||||||| || || || || || || ||||| || ||| | || | ||||| |||||
Sbjct 3737 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCT 3796
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||||| ||| || | | || | || || ||||| || | || || |||
Sbjct 3797 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 3856
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||| ||||| |||||||||||||||
Sbjct 3857 TTCCCTGTGAGTGTCTTTACAAAGATCTGCATA 3889
Score = 96.9 bits (106), Expect = 2e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||| || |||||||| ||||| || | || |||| |||| |||||| || |||||
Sbjct 3469 TTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAA 3528
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || || |||||| | || | ||||||||||| ||||| || ||
Sbjct 3529 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATT 3588
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | || | |||||| || | || ||||| || || || |||||||| ||
Sbjct 3589 TTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAAC 3648
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 3649 GAAGATCTGCATA 3661
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || || ||||| |||||||| | | | ||| |||| ||||||||||| ||||||||
Sbjct 4387 TCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAG 4446
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||| || ||| | || | ||||| || || |||||| || || |
Sbjct 4447 ATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTT 4506
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || || | ||||| || || || || || ||||| |||
Sbjct 4507 TCAATGGTGTCAGACGGCTCTACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACA 4566
Query 34971 AAGATCTGCATA 34982
|| || ||||||
Sbjct 4567 AATATTTGCATA 4578
>seq89413
Length=986
Score = 95.1 bits (104), Expect = 8e-15
Identities = 172/250 (69%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 6293 CCTTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCATCG 6352
||||| ||||||||||| || || ||||| ||||| || || |||||||| ||
Sbjct 965 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCA 906
Query 6353 CGACCAGCGCAGGATTTCTGTAGCGCCTCAAAG--GAATTGGGAATCTGCTTGAGGGCGT 6410
|| || ||||| |||||| || | || | || | |||| || | |
Sbjct 905 CGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCG--ATCTCTTTTAAACTAT 848
Query 6411 CGTTTATGCCGTTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAG 6470
| || ||||||| ||| || ||||||||||| || ||||| |||| ||| || |||||||
Sbjct 847 CATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAGTGAGTAAGATTAG 788
Query 6471 GTATTGGTACCTTGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACGAAATACG 6530
|||| |||| || | ||| || | || ||| || ||||| || ||||| || |
Sbjct 787 GTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGG 728
Query 6531 CACCGACGAC 6540
|||| || ||
Sbjct 727 CACCCACAAC 718
>seq9095
Length=14658
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||||||||| || || || || | ||| |||| || ||||| ||||| |||||
Sbjct 6245 TTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAA 6304
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| ||| | || | ||||| || || ||| ||| ||| ||
Sbjct 6305 AATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATT 6364
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | |||||| || | || || || || || || || ||||| ||
Sbjct 6365 TTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 6424
Query 34970 AAAGATCTGCAT 34981
|| || |||||
Sbjct 6425 GAAAATTTGCAT 6436
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||||||||| ||||| || || | ||| |||| || || |||||||| || ||
Sbjct 5105 TTCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAA 5164
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | || |||||| | || | ||||||||| || ||| || ||| ||
Sbjct 5165 AATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATT 5224
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | |||||| || | || || ||||| || || || || || ||
Sbjct 5225 TTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTAC 5284
Query 34970 AAAGATCTGCAT 34981
||| || |||||
Sbjct 5285 AAAAATTTGCAT 5296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324024465527352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |