Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 535 5e-147
seq7375 136 4e-27
seq7176 98.7 1e-15
>seq4562
Length=21325
Score = 535 bits (592), Expect = 5e-147
Identities = 1193/1789 (67%), Gaps = 27/1789 (2%)
Strand=Plus/Minus
Query 46964 TAATTTGTCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATA 47023
|| ||| |||| || |||||||||| ||| | ||| |||| |||||| ||||| ||
Sbjct 21099 TATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTA 21040
Query 47024 ATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGA 47083
||||| || || |||||||| | |||| | | |||||| || || | |||
Sbjct 21039 GTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCC 20980
Query 47084 ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCT 47143
||| |||||| | || ||| || || | ||||||||| || || ||||| || |||||
Sbjct 20979 ATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTCT 20920
Query 47144 ATCAGCTGCCATATCTAAAATAACCCTTT--GTGGTATCTCCCATACTGTTTTATAAATT 47201
|||||||||||| | || | ||| ||| ||||||||||| ||||| || |
Sbjct 20919 ATCAGCTGCCATCTGTATGG--ATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAA 20862
Query 47202 TGTTTAATGTCTTCTGGGAGATT---AGTATTTTGAATAGATCCTCCgttttctataatt 47258
| | | || |||| || | || | | | ||| |||||||| ||| | ||||||
Sbjct 20861 TCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 20802
Query 47259 ttgttttttaa---ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGA 47315
|||||| | ||||| || || || ||| || | | |||||||
Sbjct 20801 AGGTTTTTCATATCTTCATCCCACAAATCAGCCCG---AGTCAAATCAGTCAGAAGATGA 20745
Query 47316 GGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATAT 47375
| || || | ||||||||||||||| ||||| | || ||||| |||| |
Sbjct 20744 TGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAG 20685
Query 47376 GGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCA 47435
||||| | ||||||| | || |||| |||||| ||||| || || || ||||| | ||
Sbjct 20684 GGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCT 20625
Query 47436 ACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCC 47495
| |||| ||| | | |||| |||| ||||| ||| |||
Sbjct 20624 ATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCC 20565
Query 47496 CAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGA 47555
||||| |||| ||| | ||| | |||||| || || || |||| ||| |||
Sbjct 20564 CAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGA 20505
Query 47556 GAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAAT 47615
|| | |||||| | || | ||| | | || ||| | ||||||||| ||||| | |
Sbjct 20504 CTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGT 20445
Query 47616 GCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTT-CTGATGATTC 47674
|||| |||||| || ||||||||||||| | || ||| |||||| || | |||
Sbjct 20444 GCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACT-TTC 20386
Query 47675 AAAAGGATANNNNNNNNNNNNNAAT-GTATCTGCCAATCCTTGAACACCAATACCAATTG 47733
||| ||| || | |||||||| || ||||||||||||||||| |
Sbjct 20385 GTAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAG 20327
Query 47734 GTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAA 47793
||||||| | |||| ||| | ||||| || | ||||| || | ||| ||||
Sbjct 20326 GTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAA 20267
Query 47794 TTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACT 47853
||| |||| | |||||| ||||||| ||||||| |||
Sbjct 20266 CTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATC 20207
Query 47854 TGTTATTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT 47913
|||||||| ||||||| | ||||||||||| || || || || || || || || ||||
Sbjct 20206 TGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT 20147
Query 47914 TTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAAT 47973
| ||| ||||| | | || | || ||||| | |||||| ||||| || | ||
Sbjct 20146 CTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 20087
Query 47974 TTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTT 48033
||| |||||| | ||||||| || ||||| || | ||| | ||||| ||||| |
Sbjct 20086 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 20027
Query 48034 CTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT-AGCCTTTATAACAGCTCTAGCT 48092
| | || | ||| || || || ||||| | | || | ||| | | | || |
Sbjct 20026 CCACTTGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAAT 19968
Query 48093 TTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCT 48152
|| || | ||| ||||| |||||||| | |||||||| || ||| | | | |
Sbjct 19967 CGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCCAAAGCAGTCAGCG 19908
Query 48153 AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTC 48212
| ||||||| |||| ||||||||| | |||| | ||||| |||| |||||| ||
Sbjct 19907 AGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTTTTC 19848
Query 48213 ATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTG 48272
||||| | |||||||||||| | ||| ||| | || |||| ||| | |||||| ||
Sbjct 19847 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 19788
Query 48273 CCACTATTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331
|| | ||| | ||||| | |||||| || | ||| || |||||||| || ||||||||
Sbjct 19787 CCTGTGTTCTTCTTTAAATCCAAGAAT-TCAAATATGTCCGCATGCCAAGGCTCTAAATA 19729
Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391
||||| | | | || || ||||| || || |||||||||| ||||||||||||||||||
Sbjct 19728 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 19669
Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451
||| ||||| |||||||| || | |||||| || | ||||| || || | || |||
Sbjct 19668 ATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGA 19609
Query 48452 TCCACTAGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATAT 48508
|| |||||| || || || || || |||||| ||||| || |||||| ||
Sbjct 19608 ACCCTGAGCTCTGATGCAATGTGTA--TGTAA-ACCTATGCCACCAGCAGATTTAGAAAT 19552
Query 48509 TAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAA 48568
|| ||||| |||| | |||||| |||| ||||| || ||||| ||| ||||| ||
Sbjct 19551 TAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTAT 19492
Query 48569 TAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGC 48628
|| ||||| || | || || | || ||| || | ||| || |||
Sbjct 19491 AAGGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGC 19432
Query 48629 ATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCA 48688
||| |||| |||||||||| | || ||||| || | || || ||| || ||
Sbjct 19431 ATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTC 19372
Query 48689 TTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCA 48737
||| || ||||| || || | ||| | ||| | |||||| ||||||
Sbjct 19371 ACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTCA 19323
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 48744 TTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || ||||| ||||| | ||||||| ||||||| ||||| ||||||||||||||||||
Sbjct 18969 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 18910
Query 48804 GAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT 48853
||| || |||||| || ||| | || | || | | ||||| | |||
Sbjct 18909 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
>seq7375
Length=9560
Score = 136 bits (150), Expect = 4e-27
Identities = 157/210 (75%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 19233 ATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAA 19292
||||| || || |||||| |||||| |||||||||| |||||| ||||| || |||||
Sbjct 4028 ATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAA 3969
Query 19293 TCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATT 19352
|| || || || || ||||| || | || || || | || | || ||||| ||
Sbjct 3968 ACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTT 3909
Query 19353 TTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTT 19412
|||||||| || |||||| ||||||||| |||||||| ||||| || |||||||||||
Sbjct 3908 CTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTT 3849
Query 19413 TTC---ATCTGAGGTTAATGTATTCCAATC 19439
|| |||| ||||||| | ||||||
Sbjct 3848 CTCACAATCT---TTTAATGTCTCCCAATC 3822
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| || ||| || | |||||| || || || || |||||||| |||| |||||
Sbjct 4859 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 4800
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct 4799 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAG 4740
Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162
||| || | ||||||| | |||| || | ||||| | | ||||| || |
Sbjct 4739 CAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 4680
Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
||||||| || |||||||| | || || || | ||| ||||
Sbjct 4679 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATA 4638
Score = 96.9 bits (106), Expect = 4e-15
Identities = 84/103 (82%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501
||||| ||| ||||| ||||||||||| | |||||||| || || || ||||||||||
Sbjct 3674 TAATACCTTG-GATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTAT 3616
Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
|||| | ||||||||| ||||||| || || |||||||| ||
Sbjct 3615 ACATCTGCCATATATCTGGATATTGGATTGGGAATATAACGAA 3573
>seq7176
Length=6331
Score = 98.7 bits (108), Expect = 1e-15
Identities = 244/365 (67%), Gaps = 9/365 (2%)
Strand=Plus/Plus
Query 136634 ATGACTCC--TATTAACCCAATGTTGGCAGAATCATGTGAATCTGTAGATAAAGCATTTA 136691
|||||||| ||||| || ||||| || ||| | || | || || || | || | |
Sbjct 2581 ATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 2638
Query 136692 AAAAGTTTCCAAATGGAATATTTGCAGAAATAAAATATGACGGAGAACGTGTACAGGTTC 136751
|||| | ||||||||| || ||| | || ||||||||||| |||||||| || || || |
Sbjct 2639 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 2698
Query 136752 ACAAGAATGGAAACCACTTTGCATTTTTTAGTAGAAACATGAAACCCGTAACAAAACATA 136811
| || || ||||| | || || |||| | | | ||||| |||| || |
Sbjct 2699 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 2758
Query 136812 AAGTTGATTATCTTAATGAGTATATACCTAAAGCCTTTAAAAATGTATCATCTCTT-ATT 136870
||||| | || |||| || ||| | || ||||| ||| || | | || ||| ||
Sbjct 2759 AAGTTAGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGA-GATGACTTGATC 2817
Query 136871 TTAGATTCAGAAATAGTACTAGTAGATAAAAATAAT---AAACCATTACCATTTGGCAGT 136927
|| ||| | ||| || | | || ||| |||| | |||||||| || || || |
Sbjct 2818 TTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTACA 2877
Query 136928 TTGGGTATACATAAAAAGAAGGAATATAATGATTCATCACTATGTTTATTTGTATTTGAT 136987
|| ||||| || ||| | |||| ||| ||| | | | || |||| | ||||||||
Sbjct 2878 TTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTGAT 2937
Query 136988 TGTTT 136992
|| ||
Sbjct 2938 TGCTT 2942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561027028640760
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