Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq27008 172 4e-38
seq58137 123 2e-23
seq52194 109 4e-19
seq133270 107 1e-18
seq9095 104 2e-17
seq89413 95.1 9e-15
seq9562 82.4 6e-11
>seq27008
Length=12848
Score = 172 bits (190), Expect = 4e-38
Identities = 187/248 (75%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 7828 CGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCC 7887
|| |||| || |||| |||||||| ||||| |||||||| || || | || |||
Sbjct 4491 CGCCTGCGCAGCTTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCC 4432
Query 7888 GAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGG 7947
||||| ||||| | |||||| |||| ||||| | || ||||| ||||||||||||||
Sbjct 4431 GAAGCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGC 4372
Query 7948 GGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGAT 8007
|| ||||| || |||||| | |||| | ||||||||||| |||||||||||||| ||
Sbjct 4371 GGGCTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGAC 4312
Query 8008 AAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGGTAATTACTGAA 8067
||||| || || | || |||||||| || || || |||||||| || || ||
Sbjct 4311 CGGTGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAG 4252
Query 8068 GCGTGCGC 8075
||||||||
Sbjct 4251 GCGTGCGC 4244
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 7603 AACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGCGCGTTTTGTAAAGTGGAA 7662
|| || || |||||| |||| || | || || || || ||||||||||||||||| |||
Sbjct 4776 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 4717
Query 7663 ATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCATCGGAAGTGGGCACCGCAG 7722
|| ||| ||||| | || |||||||| | |||||||| | | ||||| || |||
Sbjct 4716 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 4657
Query 7723 TGTCCGTTTCTGCG 7736
|| || || |||||
Sbjct 4656 TGCCCCTTCCTGCG 4643
>seq58137
Length=8097
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| ||||| || || || ||||||||||||||||| ||||| || | ||
Sbjct 7750 AGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGT 7691
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| ||||| ||||| || || || |||| || |||||||| | |||| ||| |||
Sbjct 7690 CCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCC 7631
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||| || ||||||| | | || || || | || || |||| |||
Sbjct 7630 TTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTA 7571
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 7570 ATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
>seq52194
Length=4646
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611
|| || ||||| || | ||| |||||| ||||||||||| ||||| ||| | ||| |
Sbjct 3674 CGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCA 3733
Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671
|| |||| |||||| || || || || || || |||||||| | ||||| ||||| |||
Sbjct 3734 TCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTG 3793
Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731
|| ||||| ||| ||| | | || ||||| | || || || | || ||
Sbjct 3794 TCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATA 3853
Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| || || | || |||||||| ||||||||
Sbjct 3854 GTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|||||||| || || ||||| || ||| | || | || |||||||| ||||| |||||
Sbjct 3470 TCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 3529
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| || |||||||| || | ||||| |||||||||||| ||||| || |||
Sbjct 3530 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 3589
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | ||| ||||||| || || || || || || | ||| || ||
Sbjct 3590 TCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACG 3649
Query 48756 AAAATCTGCAT 48766
|| ||||||||
Sbjct 3650 AAGATCTGCAT 3660
>seq133270
Length=334
Score = 107 bits (118), Expect = 1e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 48585 ATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGC 48644
|| ||||| ||||| || | ||| | || ||||| |||||||||||||| || || |||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 48645 TGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGAC 48704
|| ||||| | || | |||||| ||||| ||| || ||||||| | | ||
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121
Query 48705 TCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGC 48764
|| || | ||||| |||| ||||| || ||||| || | ||||| ||||||||||||
Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181
Query 48765 AT 48766
||
Sbjct 182 AT 183
>seq9095
Length=14658
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| |||| ||| ||||||||||| || | || ||| || || ||||| || || ||
Sbjct 6438 CCACCCCGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 6497
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
| | || | || || | ||||| ||||| || ||||||| |||||||| | |||
Sbjct 6498 AATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 6557
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||| |||||||| ||||||| ||||| | | | || || || |||||
Sbjct 6558 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 6617
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || || ||||||||||| || || |||||
Sbjct 6618 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || || ||||| | |||| ||| | || || || ||||||||||| ||||||
Sbjct 5982 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 6041
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || | || || | |||||| || ||||| || |||| |||||||| | ||||
Sbjct 6042 AGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGA 6101
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||| || || || || || ||| | | | || || || |||||
Sbjct 6102 ATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 6161
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || |||| ||||||||||| || |||||
Sbjct 6162 TCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 6208
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || |||||||||| || || || | || || ||||||||||| || |||||
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || | || || | ||| || || || || ||||| | |||||| || | |||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || |||||||| ||| || || ||| | | | || || || |||||
Sbjct 5418 ATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACT 5477
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || ||||| || |||| || ||||||||||| |||||
Sbjct 5478 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524
>seq89413
Length=986
Score = 95.1 bits (104), Expect = 9e-15
Identities = 115/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 27695 GGAACCGTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAG-ACAGTATCCGGC 27753
|||| || |||| || ||||| || || |||||||| ||| ||| | | | |||
Sbjct 712 GGAAAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTA 771
Query 27754 CAACAAACTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGG 27813
| | | |||| ||||| ||||| || || ||||| ||||||||| | || ||||||||
Sbjct 772 GATCGTA-TACCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGG 830
Query 27814 CGGAGACGGTATCAACGATAGCCTAAAACAGATC 27847
||| ||||| ||||| ||||| ||||| |||||
Sbjct 831 CGGTGACGGCATCAATGATAGTTTAAAAGAGATC 864
>seq9562
Length=33616
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126
|| || || ||| |||||| || | ||||||||| || || || || || || ||||
Sbjct 20402 GGGTAGAAAATTCTTTCACATATCAGTTGAGCAATTCTATCACCTTTTTTAACTGCAAAA 20343
Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186
||| |||||||||||| | ||||||||| | ||| || | ||| || ||||| ||
Sbjct 20342 TCTTCACTGGAATGATTGAATAACACCACTCCAATGTTTCCACGGTAGTCTTCATCTATG 20283
Query 9187 ACACCAGC 9194
||||||||
Sbjct 20282 ACACCAGC 20275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380222818091757
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