Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 107 2e-18
seq52194 104 2e-17
seq58137 98.7 8e-16
seq89413 95.1 1e-14
seq133270 91.5 1e-13
>seq9095
Length=14658
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||||||||||||||||||| | || || ||||| || || ||| |||| ||||
Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| |||||| || |||||||| | ||| ||||||
Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCA 6090
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| |||||||| ||||| || || || | |||||| ||| | | || || ||
Sbjct 6089 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 6030
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
||||| || ||||||||| |||| ||||| ||
Sbjct 6029 TATTCAGAAGGAATCTACTTTGCATCTGGTACTA 5996
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/217 (71%), Gaps = 6/217 (3%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || ||||| ||| | || || || || || || ||| || |||||
Sbjct 6437 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTC 6378
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|| || | | || | || || |||| || || ||||||||| | ||| |||||
Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAATTCAG-GATAAAGAGGGAATTCCCCCAGATC 6319
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTA 28729
| || |||||||| ||||| || || || | |||||| | | ||||| | |||||
Sbjct 6318 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTA 6261
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
|||||||| |||||||||||| ||||| | ||| ||
Sbjct 6260 CAACATTCAGAAAGAATCTACTTTGCACCTAGTACTA 6224
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/201 (72%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||||||||| | || |||||||| ||||| ||| || |||||
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 28614 GAGACGGTGGCCGAT-CTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||||||||| || || || ||||| | ||| ||| ||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTC-AAGATAAGGAGGGGATTCCCCCAGACCA 5178
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
|||||| ||||| || || || |||||| | |||||| | | ||||| | || ||
Sbjct 5177 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CAGACTAC 5120
Query 28731 AACATTCAAAAAGAATCTACT 28751
|||||||| || |||||||||
Sbjct 5119 AACATTCAGAAGGAATCTACT 5099
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || ||||| ||| | || || ||||| || || ||| |||| ||||
Sbjct 4841 AATGCAAATTTTCGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 4782
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||||| ||||| || || | || ||||||
Sbjct 4781 TGATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 4722
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| ||||| || ||||| || || ||| |||||||| || || | || |||||
Sbjct 4721 ACAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATAA 4662
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| || |||||||||||||| ||| | || | ||| | |||| ||
Sbjct 4661 TATCCAGAAAGAATCTACTCTTCACCTTGTTCTCAGACTTAGAGGTGG 4614
>seq52194
Length=4646
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| ||| | || || ||||| || || ||| ||||| |||
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || || ||| |||||||||||| | ||| |||||||
Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGATCAA 3769
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | || || || || ||||| || |||| ||| | ||| | | || || ||
Sbjct 3768 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 3709
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| || ||| ||||| |||||||| | ||||||||||| ||
Sbjct 3708 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGTAT 3659
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
||||| ||||| | ||| ||| |||||| | || |||||||| || ||||| |||||
Sbjct 3567 GACAAGGAGGGCATTCCCCCAGACCAACAGCGTCTCATCTTTGCTGGTAAACAGTTGGAG 3508
Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756
||| ||| || | ||||||||||| |||||||||||||| ||||
Sbjct 3507 GATGGCCGCACTCTGTCGGATTATAACATCCAAAAAGAATCTACCTTGCA 3458
>seq58137
Length=8097
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || ||||| |||||| | ||||||||||||||||| ||| ||||||
Sbjct 7530 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 7589
Query 28611 TCAGAGACGGTGGCCGATCT-CAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|| || || | | || | |||| |||| || ||||| || || | || |||
Sbjct 7590 TCCGATACTATTGAAAATGTAAAAGCCAAAATTC-AAGACAAGGAAGGCATTCCTCCAGA 7648
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|||||| | | || || || || || ||||||||||| || | | || ||
Sbjct 7649 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTA 7708
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|| |||||||||||||||||||| ||| |||||||
Sbjct 7709 CAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 7744
>seq89413
Length=986
Score = 95.1 bits (104), Expect = 1e-14
Identities = 177/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 106732 GGCTCGTTCCAAGCGGACACGCCTTTTTGCGGCTTCTGTATGGCAGCCCAGGGATCGTGA 106791
||||||||||| | |||| |||||||| || || |||| || ||||| ||||||||
Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927
Query 106792 ATAGAAACTTTAAAATCGGCGCGCCCTTTGCATGATTTTTGCAAAGATTCAAAACTTCCC 106851
|| || ||||| || || | || || | || || || | | || ||||| ||
Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867
Query 106852 GGTATTGTTTTTAAGGCATCGTTTATTCCATCACCGCCGCAGATGGGAATAAAACCGTAC 106911
|| |||||| ||| || || || ||||||||||| || |||||||| |||||
Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807
Query 106912 AATAAATGTGATAAATTGGGCAGCGGGACTTTATCTACGGGAAAATTGCGGCCATACACG 106971
| || || | | ||| || | || | ||||||||| || || | ||| ||
Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747
Query 106972 CCCCATTCGACAAAATACGC 106991
|||||||| || || || ||
Sbjct 746 CCCCATTCTACGAAGTAGGC 727
>seq133270
Length=334
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/148 (74%), Gaps = 4/148 (3%)
Strand=Plus/Minus
Query 28638 AAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAA 28697
|||||| |||||||| || | || |||||||| | ||||| |||||||||||
Sbjct 327 AAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAACAACGTCTTATTTTTGCGGGCAAG 268
Query 28698 CAATTGGAAGAT--TCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGC 28755
||||| |||||| || | ||||| | || || ||||| ||||||||||||||| |||
Sbjct 267 CAATTAGAAGATGGTCGTACACTAT--CTGACTACAACATCCAAAAAGAATCTACTTTGC 210
Query 28756 ACATGGTATTAAGATTACGAGGAGGGAT 28783
|| | ||| | | ||| |||| || ||
Sbjct 209 ACTTAGTACTTCGTTTAAGAGGTGGTAT 182
Score = 82.4 bits (90), Expect = 6e-11
Identities = 114/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| ||||| |||| || || ||||||||| ||| |||||| ||
Sbjct 183 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 124
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | || || |||| || ||||||||||| | || |||||
Sbjct 123 GATACTATTGAAAATGTAAAAGCTAAAATTCAA-GACAAAGAGGGCATCCCTCCTGATCA 65
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT 28709
||| | ||||||||||| || || ||||||||||||
Sbjct 64 GCAGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424606580935461
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |