Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 178 7e-40
>seq4562
Length=21325
Score = 178 bits (196), Expect = 7e-40
Identities = 281/400 (70%), Gaps = 2/400 (1%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
|||| | ||| || || ||| | | |||||| | |||||| ||||| | ||||||||
Sbjct 19875 CCAAACTTCATCTTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAA 19816
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAA 26024
| ||||| |||||||||||||| || || ||| ||||| |||| ||| ||||| ||||
Sbjct 19815 CAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAATTCAA 19757
Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084
| || || | ||||| || |||||||| || ||||| || | ||| |||||
Sbjct 19756 ATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCAC 19697
Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144
|||||||||| ||||| ||||| | || | ||| |||||||||| |||| ||| | |
Sbjct 19696 CTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCG 19637
Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204
| | || || |||| | || | || || | ||| || || | ||| | ||
Sbjct 19636 AGACCCCATTAGTGCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAAC 19577
Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264
| || |||||||| |||| ||||| |||||| | | | ||||| ||||| ||||
Sbjct 19576 CTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTT 19517
Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304
|||||||| ||||||| ||| | ||||| || ||
Sbjct 19516 CAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGA 19477
Score = 116 bits (128), Expect = 2e-21
Identities = 351/529 (66%), Gaps = 16/529 (3%)
Strand=Plus/Minus
Query 24645 CGATATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAA 24701
|| |||||| |||| |||| ||||| || |||| | |||||||||| || | |||
Sbjct 21102 CGTTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAA 21043
Query 24702 GATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTT 24761
| || |||||||| ||||| || | | |||||| ||| ||||| || || || ||||
Sbjct 21042 G-TAGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTT 20984
Query 24762 TTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTT 24821
|| || ||| | | | | | | ||| | |||||| |||| | |||| |
Sbjct 20983 TTCCATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTC 20924
Query 24822 GTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATC 24881
|||||| || || | | ||| ||||||| || || || | | ||||||||
Sbjct 20923 CTCTATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACA 20864
Query 24882 TCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AA 24939
||| |||| || | ||||| || |||| | ||| | |||||||| || | | ||
Sbjct 20863 AATCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAA 20804
Query 24940 TA-GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAG 24997
|| | || | |||||| ||| | || | |||| ||| | | |
Sbjct 20803 TAAGGTT---TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAA-ATCAGTCAGAAGA 20748
Query 24998 TGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAG 25055
|| | || | | | |||||||||||| || |||||||| ||| ||| ||||| |
Sbjct 20747 TGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATG 20690
Query 25056 TGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTA 25115
| || ||||||||| ||||| | || || | ||||| | |||||| || || |||||
Sbjct 20689 TAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAG 20630
Query 25116 ATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||||| ||||| ||||| | |||||||| ||| | |||| || |||
Sbjct 20629 GAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 20581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252565201990925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |