Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 161 1e-34
seq7375 123 4e-23
seq52194 118 2e-21
seq133270 105 1e-17
seq58137 102 1e-16
>seq9095
Length=14658
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | |||||| ||||||| ||||||||||| |||||||| |||| ||||
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| || || || || ||||||||||| ||||| || |||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| ||| || ||||| || |||||| | || || ||||| ||||||
Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 4889
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| | || | ||||||||||| | ||||||| ||
Sbjct 4888 ATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGG 4842
Score = 154 bits (170), Expect = 2e-32
Identities = 144/183 (79%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| ||||||| |||||||| ||||| ||||| |||| |||
Sbjct 6209 AATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6150
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || || ||||| || |||||||| ||||| || ||||| ||
Sbjct 6149 TGATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCA 6090
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||||| | |||| ||| || |||||||| |||||| | ||| |||| || || ||
Sbjct 6089 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 6030
Query 156002 TAT 156004
|||
Sbjct 6029 TAT 6027
Score = 152 bits (168), Expect = 8e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | |||||| ||||||| ||||||||||| |||||||| |||| ||||
Sbjct 5752 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5693
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || ||| || || || || ||||||||||| ||||| || |||
Sbjct 5692 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 5633
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| || || ||||| || |||||| | || || ||||| ||||||
Sbjct 5632 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 5573
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| | || | |||||||| || | ||||||| ||
Sbjct 5572 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 5526
Score = 116 bits (128), Expect = 5e-21
Identities = 120/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| |||||||| ||| | ||||| || ||
Sbjct 5981 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACACTGGAAGTTGAGCCCTC 5922
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || || ||||| |||||||| ||||| || |||||||| ||
Sbjct 5921 TGACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 5862
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|||||| | |||| ||| || |||||||| ||||||
Sbjct 5861 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGAT 5825
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| | ||||| ||||||||||| | ||||| || ||||
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 5237
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || ||| ||||| |||||||| || || || || ||||| |||
Sbjct 5236 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCAA 5177
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || | |||| || || || || || |||||| | || ||||||| || ||
Sbjct 5176 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCAGACTACAAC 5117
Query 156003 AT 156004
||
Sbjct 5116 AT 5115
>seq7375
Length=9560
Score = 123 bits (136), Expect = 4e-23
Identities = 154/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470
|||| || | ||| ||||||| ||||| ||||| ||||| ||||| || ||||| |
Sbjct 4047 TTTCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACAT 3988
Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTAT 18530
|||||||||| || ||||||| ||| || | || || || | ||||| |||
Sbjct 3987 TTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTG 3928
Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590
| || | || ||||| ||||||||||| ||||| |||| || ||| || ||||| || |
Sbjct 3927 AGAAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGA 3868
Query 18591 CATATTTAATGAAATGTTTTTCATTATCCTT 18621
||| || || |||||||| ||| ||| ||
Sbjct 3867 CATGCTTGATAAAATGTTTCTCACAATCTTT 3837
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 17869 GTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCAT 17928
||||||||| ||||| ||||| ||||| ||||| || |||||||| || || | ||||||
Sbjct 6818 GTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAACGAGATGAGATTCAT 6759
Query 17929 AAAATCAAATGGATT 17943
|||||| ||||||||
Sbjct 6758 AAAATCGAATGGATT 6744
>seq52194
Length=4646
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| | ||||||||||| || || || ||||| || ||
Sbjct 4117 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATC 4058
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| || ||| ||| || |||||||| ||||| || |||||||| ||
Sbjct 4057 CGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 3998
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || |||||||| || |||||| | | || | || || || ||
Sbjct 3997 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 3938
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| |||||| | || ||||| || ||
Sbjct 3937 TATCCAGAAAGAGTCCACCCTTCACTTGGT 3908
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||| | || || |||||||| ||||||||||| ||| ||
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| || ||| || || ||||| ||||| || || || ||||| |||
Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGATCAA 3769
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| || || |||||||| || ||| | ||| | || || || |||
Sbjct 3768 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 3709
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || | || || || ||| | ||| |||| |||
Sbjct 3708 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGT 3661
Score = 105 bits (116), Expect = 1e-17
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || ||| | || || || ||||| || | ||||| || |||
Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCT 4518
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || || ||| || ||||||||||| || || || ||||| |||
Sbjct 4517 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 4458
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | |||||| || ||||| |||||| | || ||||| || || ||
Sbjct 4457 CAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAAC 4398
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGT 156031
|| ||||| ||| | || |||||||||||
Sbjct 4397 AT--CCAAAAGGAGTCTACCCTTCATTTAGT 4369
>seq133270
Length=334
Score = 105 bits (116), Expect = 1e-17
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| ||||||| | |||||||| || ||||| | ||||| ||| |||
Sbjct 183 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 124
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||| || ||| |||||| ||||| ||||| ||||| ||||| || ||
Sbjct 123 GATACTATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGCATCCCTCCTGATCAG 64
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|| | | || | |||||||||||| | ||||||
Sbjct 63 CAGCGTCTTATCTTTGCCGGTAAGCAATTGGAAGAT 28
>seq58137
Length=8097
Score = 102 bits (112), Expect = 1e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 7997 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 8056
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGA 155923
|| | ||| ||| |||||| |||||| ||||| |||||
Sbjct 8057 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGA 8097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 730463521484400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |