Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 163 6e-35
seq58137 159 7e-34
seq52194 145 1e-29
seq21475 134 3e-26
seq7375 131 3e-25
seq133270 107 4e-18
>seq9095
Length=14658
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| || |||||||| ||||||| ||| || ||||||||| ||
Sbjct 4839 ATTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCT 4898
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| || |||| |||| ||| || |||||||| || | ||| |||||||||||
Sbjct 4899 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGA 4958
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || || || ||| ||||| || | || || | |||
Sbjct 4959 GGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 5018
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| ||||| ||||| ||||| | |||||| | ||| || |||||
Sbjct 5019 ACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| || |||||||| ||||||| ||| || ||||||||| ||
Sbjct 5523 ATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCT 5582
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| || |||| |||| ||| || ||||| || || | ||| |||||||||||
Sbjct 5583 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGA 5642
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || || || ||| ||||| || | || || | |||
Sbjct 5643 GGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 5702
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| ||||| ||||| ||||| | |||||| | ||| || |||||
Sbjct 5703 ACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | ||||||||||||||||| || || || || || ||
Sbjct 5067 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCT 5126
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| ||| ||| |||| || | |||||| ||||| || || | |||||||| || ||
Sbjct 5127 GATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGG 5186
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || |||||||| ||||| ||| ||||| || | || || | ||
Sbjct 5187 GGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCA 5246
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| |||||||| ||||||||||| | ||||| | ||| || |||||
Sbjct 5247 ACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | ||||||||||||||||| || || ||||| || |||
Sbjct 5751 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCA 5810
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| ||| |||| || | || || |||||||| || | || ||||| || ||
Sbjct 5811 GACAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 5870
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| |||||||| |||||||| ||||| || ||||| || | || || | ||
Sbjct 5871 GGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 5930
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| || || || ||||| ||||| | ||| || | |||||| ||||||
Sbjct 5931 ACTTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 5981
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||||||||| | | || | || | ||||| ||||| ||||||||| || ||
Sbjct 4613 ACCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGA 4672
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||||| || |||| |||| ||| || |||||||| || | ||| |||||||| || ||
Sbjct 4673 CAATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGG 4732
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| |||||| || ||||| ||| | ||| || | ||| ||
Sbjct 4733 AATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 4792
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||| | ||| || ||||| ||||| | ||| || | || || ||||||
Sbjct 4793 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841
>seq58137
Length=8097
Score = 159 bits (176), Expect = 7e-34
Identities = 175/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||| ||||| || || | ||||| ||||| ||||| || |||
Sbjct 7762 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCA 7703
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| | || |||||||| || ||||| || || || | |||||||| ||
Sbjct 7702 GAAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 7643
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| ||||||||| |||| ||| || | |||
Sbjct 7642 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7583
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| | ||||||||||||||| || | |||||| | ||| |||||||||||
Sbjct 7582 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
Score = 105 bits (116), Expect = 1e-17
Identities = 95/117 (81%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||| || | ||| || ||||||||||||| |||| || ||| || |||||||||||
Sbjct 7998 ATACCGCCACGAAGTCGCAATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATC 7940
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422
||||||||| || |||| |||| |||||| |||||||| || | |||||||||||
Sbjct 7939 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATC 7883
>seq52194
Length=4646
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | ||||||||| | |||| ||| || ||| || || ||
Sbjct 4348 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCC 4407
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| || ||| |||| |||| ||||| || |||||||| | | |||||||| ||
Sbjct 4408 GATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGG 4467
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||||||||| || ||| |||||||| || | || |||| |||
Sbjct 4468 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCT 4527
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || || || || |||| ||| || | |||||| |||||
Sbjct 4528 ACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||| | ||||||||| || |||| ||||| ||| ||||||||
Sbjct 3431 ATTCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCC 3490
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| ||||| ||||||||||||||||| | | |||||| || ||
Sbjct 3491 GACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 3550
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || ||||| || ||| || ||||| |||| || || | ||
Sbjct 3551 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCA 3610
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| ||||| || ||||| | || |||| || ||||||||
Sbjct 3611 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
>seq21475
Length=13715
Score = 134 bits (148), Expect = 3e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCA 192366
|||| || | ||| || | || | ||| || || | || ||| || || || || |||
Sbjct 11124 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGA-ATGTTGTAGTCA 11066
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| |||| || | |||||||||||||||||| || | || || || |||
Sbjct 11065 GACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGT 11006
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| |||||| ||||||||| ||||| ||| || | ||
Sbjct 11005 GGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCC 10946
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || || |||||||||||||| || | || || | || || ||||||
Sbjct 10945 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895
>seq7375
Length=9560
Score = 131 bits (144), Expect = 3e-25
Identities = 146/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165
||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| ||
Sbjct 4018 ATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAG 3959
Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225
|| ||||| | ||||| || |||| || || || || |||||| |||
Sbjct 3958 CACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACA 3899
Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285
||||||||||| ||||| ||||||||||| || | || ||||||||||| ||| ||||
Sbjct 3898 ATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCT 3839
Query 50286 TTTAAATTTTCCCAA 50300
||||| | ||||||
Sbjct 3838 TTTAATGTCTCCCAA 3824
Score = 107 bits (118), Expect = 4e-18
Identities = 161/225 (72%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905
|||| |||||||| |||| |||||| || ||||| ||||| ||||| | |||| ||||
Sbjct 4859 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 4800
Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965
| | |||||||||||| ||||| || | || || ||||| ||||| || ||||| |
Sbjct 4799 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAG 4740
Query 49966 CTATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AATATCCAATTTATAGCCCAATC 50023
| ||||| | | |||||| || | || | || ||||| | || ||||| ||
Sbjct 4739 CAATTATACGTTCTCCAA--ATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 4682
Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068
||| || || || | | | |||| | |||| || || || |||||
Sbjct 4681 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 4637
>seq133270
Length=334
Score = 107 bits (118), Expect = 4e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| | |||||| || ||||||| ||||| ||| || || |||
Sbjct 182 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 241
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| ||| || |||| || ||||| || || ||||| || | | |||||||| ||
Sbjct 242 GATAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 301
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTA 192453
|| || |||||||| ||||| ||||||
Sbjct 302 GGAATGCCTTCTTTGTCTTGGATTTTA 328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982538015059650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |