Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 154 3e-32
seq9095 145 1e-29
seq21475 131 3e-25
seq7375 125 1e-23
seq52194 122 2e-22
>seq58137
Length=8097
Score = 154 bits (170), Expect = 3e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || ||||| || || | ||||| ||||| |||||| || ||
Sbjct 7762 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCA 7703
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | ||| |||| |||||||| || ||||| ||||| || | ||||| || ||
Sbjct 7702 GAAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 7643
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| ||||||||| |||||||| || | |||
Sbjct 7642 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7583
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | ||||||||||||||| || | |||||| | || |||||||||||
Sbjct 7582 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7530
Score = 93.3 bits (102), Expect = 8e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | |||||| ||||||||||||| |||| || || ||||||||||||
Sbjct 7998 ATACCGCCACGAAGTCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 7939
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTC 171955
||||| | || | || |||| |||||| ||||||||||| | |||||||| ||
Sbjct 7938 GATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATC 7883
>seq9095
Length=14658
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || || |||||||| ||||||| ||| || |||||||| |||
Sbjct 4839 ATTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCT 4898
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || |||| ||| || ||||||||||| | ||| ||||| |||||
Sbjct 4899 GACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGA 4958
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || || || ||| ||||| || || || || | |||
Sbjct 4959 GGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCC 5018
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| ||||| ||||| ||||| | |||||| | || || |||||
Sbjct 5019 ACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 145 bits (160), Expect = 1e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||||||||||||||| || || ||| || || |||
Sbjct 5067 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCT 5126
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | ||| | || || | |||||| ||||| ||||| | ||||||||||| ||
Sbjct 5127 GATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGG 5186
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || |||||||| ||||| ||| ||||| || || || || | ||
Sbjct 5187 GGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCA 5246
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| ||||||||||| | ||||| | || || |||||
Sbjct 5247 ACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 134 bits (148), Expect = 2e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||||||||||| | || | || | ||||| ||||| |||||||| |||||
Sbjct 4613 ACCACCTCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGA 4672
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| | || | || |||| ||| || ||||||||||| | ||| ||||| || || ||
Sbjct 4673 CAATGTACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGG 4732
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| |||||| || ||||| ||| ||||| || | ||| ||
Sbjct 4733 AATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 4792
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||| | ||| || ||||| ||||| | ||| || | ||| || ||||||
Sbjct 4793 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCATT 4841
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||| || ||||||| || || ||||||||| ||
Sbjct 5295 ATCCCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCA 5354
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || ||| | || || | ||||| ||||| ||||| | ||||||||||| ||
Sbjct 5355 GACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGA 5414
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| |||||| || ||||| ||| ||||| || | |||
Sbjct 5415 GGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 5474
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| || ||||| ||||| | ||| || | || || ||||||
Sbjct 5475 ACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 5525
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || || | ||||||||||||||||| || || |||||| || ||
Sbjct 5751 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCA 5810
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | ||| | || || | || || ||||||||||| | || |||||||| ||
Sbjct 5811 GACAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 5870
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| |||||||| ||||| || ||||| || || || || | ||
Sbjct 5871 GGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 5930
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| || || || ||||| ||||| | ||| || | ||||| ||||||
Sbjct 5931 ACTTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 5981
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || |||| ||| | ||| ||||||| || || |||||| || ||
Sbjct 5979 ATTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 6038
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || ||| | || || | || || ||||||||||| | ||| ||||| || ||
Sbjct 6039 GATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGG 6098
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || |||||||| || ||||| || ||||| || ||||| || | |||
Sbjct 6099 GGAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 6158
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | || || ||||| ||||| | |||||| | ||||| ||||||
Sbjct 6159 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 6209
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| || |||| ||||| || ||||||| ||||| ||| || |||||
Sbjct 6207 ATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCA 6266
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | ||| | || || | || || ||||||||||| | ||| || || || ||
Sbjct 6267 GATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 6326
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| |||||||| || ||||| ||| ||||| || ||||| || | ||
Sbjct 6327 GGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCA 6386
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| ||| || || || ||||| | ||| || | ||| || ||||||
Sbjct 6387 ACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 6437
>seq21475
Length=13715
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900
|||| || | |||||| | || | ||| || || | || || ||| || || || |
Sbjct 11124 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 11065
Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960
| || | ||| | || || | ||||||||||||||| || || | || ||||| ||||
Sbjct 11064 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 11005
Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020
| || ||||| |||||||| |||||| ||||||||| ||||||||| || | || |
Sbjct 11004 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCA 10945
Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
| || || |||||||||||||| || | || || | ||| || ||||||
Sbjct 10944 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 10895
>seq7375
Length=9560
Score = 125 bits (138), Expect = 1e-23
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475
||| ||||| || ||||| ||| ||||||||| |||||||| ||| || ||| ||
Sbjct 4010 AGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGC 3951
Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535
||| | ||||| || |||| || || || || |||||| |||||||||||
Sbjct 3950 TTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATC 3891
Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595
||| ||||| ||||||||||| |||| || ||||||||||| ||| ||||||||| |
Sbjct 3890 AGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGT 3831
Query 39596 TTCCCAA 39602
||||||
Sbjct 3830 CTCCCAA 3824
Score = 104 bits (114), Expect = 4e-17
Identities = 159/223 (71%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209
|| |||||||| |||| |||||| || ||||| ||||| ||||| | |||| |||||
Sbjct 4857 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 4798
Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269
| |||||||||||| ||||| || | || || ||||| ||||| || ||||| ||
Sbjct 4797 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCA 4738
Query 39270 ATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AAAATCCAATTTATGGCCCAATCTG 39327
||||| | | |||||| || | || | || ||||| | || ||||| ||||
Sbjct 4737 ATTATACGTTCTCCAA--ATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 4680
Query 39328 CtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370
| || || || | | | |||| | |||| || || || |||||
Sbjct 4679 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 4637
>seq52194
Length=4646
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || | ||||||||| || |||| ||||| || ||||||||
Sbjct 3431 ATTCCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCC 3490
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || ||||| |||||||||||||| || | | ||||||||| ||
Sbjct 3491 GACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 3550
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||| || ||| || ||||| ||||| || || | ||
Sbjct 3551 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCA 3610
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | ||| ||||| || ||||| | || |||| ||| ||||||||
Sbjct 3611 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||||| || || | ||||||||| | |||| ||| || || || || ||
Sbjct 4348 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCC 4407
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | ||| | || |||| ||||| || ||||| || | | ||||| || ||
Sbjct 4408 GATAAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGG 4467
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||||||||| || ||| |||||||| || || || |||| |||
Sbjct 4468 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCT 4527
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| || || || || |||| ||| || | ||||| |||||
Sbjct 4528 ACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903394077082200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |