Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq47188 176 1e-38
seq4911 129 2e-24
seq4562 116 1e-20
>seq47188
Length=17172
Score = 176 bits (194), Expect = 1e-38
Identities = 342/497 (69%), Gaps = 10/497 (2%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||||| | ||| ||| |||||| || || ||||||| || ||
Sbjct 14416 CCTATCAAATCTACCAGGTCTTAATAAGGCTTTGTCTAAAATGTCCACTCTGTTAGTGGC 14475
Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966
|| ||||| |||| | || | | ||| || || |||||||| || || |||
Sbjct 14476 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 14533
Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026
||||| || | ||| ||| || || || | || | | | || ||| |||||
Sbjct 14534 TTAAGAGTATTTTCTTGTTCTGAAT--GACCCCCA--AAACTTCTGCCTC-CTC-TTTTT 14587
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||||||||| ||||| ||||| || | | ||| |||| || || | || |||
Sbjct 14588 CTACCAACAGCATCTATTTCATCAATAAATAATATACAGGGAGCATGTTTCCGTGCCATT 14647
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| || | || || || | || | |||| ||||||| ||||||||| ||| || |||
Sbjct 14648 GAGAACATATCCCTGACCCTAGAAGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 14707
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| |||||| ||| || | ||||| || || || ||| ||| | || ||||| ||
Sbjct 14708 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 14767
Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266
||||| |||||||| ||||| ||||| ||||||| || | ||| || || |
Sbjct 14768 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCCTAAATCA 14827
Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
|||||| || |||| |||| || || | |||| |||| || |||| ||| || ||
Sbjct 14828 ATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTCC 14887
Query 289327 TCACATCCTGCTACATC 289343
||||| || ||||||||
Sbjct 14888 TCACAACCAGCTACATC 14904
>seq4911
Length=48505
Score = 129 bits (142), Expect = 2e-24
Identities = 209/295 (71%), Gaps = 8/295 (3%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
||||||| | ||||| || || ||||| ||| ||||||||||| ||||| |||||||
Sbjct 20790 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGTTGAATGTAACCAG 20848
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
|| || ||||||||||| |||||||| ||||| ||||||| |||||||| |||||
Sbjct 20849 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATAGCGTGGAAAT 20908
Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| | ||| ||| | || ||| | || | || |||||||| | | || |
Sbjct 20909 AAAACTCAGAGGGTGTCAAGCCGGCAAGGTATGAATTTTCGACGAAACCTCTGGATTCTG 20968
Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788
| || ||||||| ||| | || ||||||| || || || | | ||| | || |
Sbjct 20969 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 21025
Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||||| ||||||||||| || || | || | ||| | ||| || || ||
Sbjct 21026 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 21080
>seq4562
Length=21325
Score = 116 bits (128), Expect = 1e-20
Identities = 570/895 (64%), Gaps = 28/895 (3%)
Strand=Plus/Minus
Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531
|| |||||||| |||||||||| || ||||||||| || || ||| ||| || |
Sbjct 20288 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 20232
Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591
||| |||||| | | | |||| | |||| ||| |||||||| ||| | ||
Sbjct 20231 TCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCA---ACAAACATGTTAAGTGCTATG 20175
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651
|| || || || || || || || | || |||||| |||| ||| |||
Sbjct 20174 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCTGTGCAA 20115
Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711
|| || || || || ||||| | ||| || || ||| || |||||||||||||||
Sbjct 20114 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 20055
Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCCAG 155768
|| || | |||||||| || || ||||||| || || || | ||| ||| |||
Sbjct 20054 TTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTT---CCAT 19998
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGC 155828
| || | || | | ||| || | ||| ||| |||||||| |||| |
Sbjct 19997 AACTCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGTATATAA- 19939
Query 155829 GTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886
||| || ||||| || | || ||| || ||||| | | || || || | |
Sbjct 19938 -TTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACTGTCATGAGGACACATGA 19880
Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946
| ||||| || || ||| | | |||||| | ||| ||| | |||||
Sbjct 19879 GACTCCAAACTTCATCTTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCAT 19820
Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAAGAAT 156005
| || || || || || | || || | || ||| |||||| || || ||||||
Sbjct 19819 AAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAAT 19761
Query 156006 TCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG--- 156062
|| || || | ||| ||||| | ||| || ||||| || | |||
Sbjct 19760 TCAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTT 19701
Query 156063 CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCA 156122
||||| ||||||||||| | ||||| || || | || | | ||| || | | ||||
Sbjct 19700 CCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCA 19641
Query 156123 TTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT--ATGAATAT 156180
|| || ||||| || || || | ||||| ||||| || ||| |||
Sbjct 19640 TTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCC--TGAGCTCTGATGCAATGTGTAT 19583
Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240
||| || || ||||| | ||||||||||| || |||| |||| ||||| ||||
Sbjct 19582 GTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAA 19523
Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300
|||||||||| ||| |||| ||| | || || | || || | || || || |
Sbjct 19522 TACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCCGCG 19463
Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|||| | ||| ||| |||||||| ||||||| ||||||| || | |||||
Sbjct 19462 GTGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 19408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1468914293062183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |