Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1015 129 7e-24 seq4682 105 8e-17 >seq1015 Length=2426 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | || | ||||| |||||| | ||| | | || Sbjct 2030 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 2089 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| | |||||| |||| || || || ||||||| | |||| || |||| | Sbjct 2090 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 2149 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| |||| Sbjct 2150 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 2209 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || |||||||| ||||||||| Sbjct 2210 GGACTTGTTTGAGCACTTTGTAGATG 2235 >seq4682 Length=19110 Score = 105 bits (116), Expect = 8e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || || || |||| |||||| | || | || |||||| Sbjct 16889 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 16830 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||||||||||||| ||||||| ||||||| || | || ||| Sbjct 16829 GACCTCTTGTTGTAGTGCGCCAGACGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCG 16770 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| ||| Sbjct 16769 TTGACAAAGGAATTCATTATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 16710 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| | ||| ||||| ||| Sbjct 16709 TGCTTCAACACTTTGTAAATG 16689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6094504603470003