Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1015 129 7e-24
seq4682 105 8e-17
>seq1015
Length=2426
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| |||||| ||| | || | ||||| |||||| | ||| | | ||
Sbjct 2030 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 2089
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||||| | |||||| |||| || || || ||||||| | |||| || |||| |
Sbjct 2090 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 2149
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| ||||
Sbjct 2150 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 2209
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || |||||||| |||||||||
Sbjct 2210 GGACTTGTTTGAGCACTTTGTAGATG 2235
>seq4682
Length=19110
Score = 105 bits (116), Expect = 8e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|| || |||||| | | || || || |||| |||||| | || | || ||||||
Sbjct 16889 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 16830
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
| |||||| |||||||||||||| ||||||| ||||||| || | || |||
Sbjct 16829 GACCTCTTGTTGTAGTGCGCCAGACGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCG 16770
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
|||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| |||
Sbjct 16769 TTGACAAAGGAATTCATTATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 16710
Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548
||||| | ||| ||||| |||
Sbjct 16709 TGCTTCAACACTTTGTAAATG 16689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6094504603470003
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |