Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 109 4e-19
seq21475 105 4e-18
seq133270 104 2e-17
seq52194 98.7 6e-16
seq58137 89.7 3e-13
>seq9095
Length=14658
Score = 109 bits (120), Expect = 4e-19
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || |||||||| || | ||||| |||| || |||||||||||||||||
Sbjct 6473 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAA 6532
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||| || ||| | || | || |||||||| | || ||| || |||
Sbjct 6533 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTT 6592
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| || || || || | || ||||| || || || | || |||||
Sbjct 6593 TTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTAC 6652
Query 34966 AAAGATCTGCATGAT 34980
||||| ||||||||
Sbjct 6653 GAAGATTTGCATGAT 6667
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||||||||| ||||| ||||| |||| |||| || ||||| ||||| |||||
Sbjct 5106 TCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAA 5165
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || | || |||||| | || | ||||||||| || | |||||| ||| || |
Sbjct 5166 ATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTT 5225
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| | ||| || |||| || || || || || || || || ||||||
Sbjct 5226 TCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACA 5285
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 5286 AAAATTTGCAT 5296
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || |||||||| || | ||||| |||| |||||||||||||| |||||
Sbjct 5561 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAA 5620
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||| || || | || | || || ||||| | || ||| ||| ||
Sbjct 5621 AATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATT 5680
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| || || || || | ||| || || || || || || || || ||
Sbjct 5681 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 5740
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 5741 AAAAATTTGCAT 5752
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || |||| || || || ||||| | || || ||||||||||| || || |
Sbjct 6208 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 6267
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|||| |||| |||| || || |||||||| || || || |||| |||||| ||| | |
Sbjct 6268 ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6327
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||| || || | ||||| ||| || | | || | ||| | ||| |
Sbjct 6328 GAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 6387
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || ||||| || || || |||||||| || || |||||
Sbjct 6388 CTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 6436
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || || ||||||| || || ||||| || |||||||| || | | ||| ||
Sbjct 4626 CTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTACGCCCA 4685
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| || || ||||||| ||| || ||| | || | || ||||||
Sbjct 4686 TCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTG 4745
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | ||||| || || | |||| | ||| || || || || | || ||
Sbjct 4746 TCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 4805
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || || || |||||||| || || |||||
Sbjct 4806 GTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCAT 4840
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || |||||||| || | ||||| |||| |||||||||||||| || ||
Sbjct 4877 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAA 4936
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||| || || | || | || || ||||| | || ||| ||| ||
Sbjct 4937 AATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATT 4996
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | ||| || || || || | ||| || || || || || || || || ||
Sbjct 4997 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 5056
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 5057 AAAAATTTGCAT 5068
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| ||||| |||||||| || || |||| |||| || || || || || |||||
Sbjct 5334 TCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAA 5393
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| | || |||||| | || | || |||||||| | ||||| || || |
Sbjct 5394 ATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTT 5453
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
|||| | ||| || || || || | || || || || || || || |||||||||
Sbjct 5454 TCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACA 5513
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 5514 AAAATTTGCAT 5524
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| || ||||| || || |||| |||| || || |||||||| || ||
Sbjct 5790 TCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 5849
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || | ||| |||||| | || | || ||||| || | ||||| || || |
Sbjct 5850 ATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTT 5909
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| || ||| || || | || || || || || || || |||||||||
Sbjct 5910 TCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACA 5969
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 5970 AATATTTGCAT 5980
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || |||| || || ||||| || | || ||||||||||| || ||||| |
Sbjct 5980 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6039
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|||| |||| |||| || || |||||||| || || || |||| ||| || ||| | |
Sbjct 6040 ATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 6099
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||| || || | ||||| || || | | || | ||| || || |
Sbjct 6100 GAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6159
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || || || || || || || |||||||| || |||||
Sbjct 6160 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 6208
>seq21475
Length=13715
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| |||||||| ||||| || | | || |||| || ||||| || || || |||
Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| |||||||||||| | || | || ||||| || | ||||| ||| || |
Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 10967
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
|||| | ||| |||||| || || | ||| ||||| || ||||| |||||||| ||
Sbjct 10966 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 10907
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 10906 AAAATTTGCAT 10896
>seq133270
Length=334
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34796 ATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855
||||| ||||| || ||| |||| |||| |||| |||||| ||||| ||||| || ||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915
||||| || | || | ||||| ||||| | ||||| ||| || | | || |
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121
Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975
||| || || || || | ||| ||||||||||| || ||||| || ||||| ||||||
Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181
Query 34976 AT 34977
||
Sbjct 182 AT 183
>seq52194
Length=4646
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| |||| ||| ||||| || || ||||| || ||| |||| ||||
Sbjct 3905 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 3964
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||||||||| || |||||||| || ||||| || ||| | || | || ||||| ||
Sbjct 3965 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 4024
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||| || | | || | || | ||| || || | ||||| ||
Sbjct 4025 TGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTT 4084
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || || || ||||| || |||||
Sbjct 4085 TTTCCAGTAAGTGTTTTGACAAATATTTGCAT 4116
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||| | ||| ||| |||||||| || ||||| || || | || |||| |||
Sbjct 3680 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCC 3739
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| ||||| || ||||| || || ||||| || ||| | || | ||||| ||||| |
Sbjct 3740 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGG 3799
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || ||| || | | || | || || || || || | || || || ||
Sbjct 3800 ATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTC 3859
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| ||||||||||||||||||||
Sbjct 3860 CCTGTGAGTGTCTTTACAAAGATCTGCAT 3888
>seq58137
Length=8097
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| || || || ||||| || ||||| || ||| |||| | || |||
Sbjct 7741 ACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCTTCC 7682
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||||||| ||||| |||| ||||| || ||| | || | || |||||||| |
Sbjct 7681 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 7622
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||||| ||| || | | || | || | || || || | || ||||| ||
Sbjct 7621 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 7562
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || || ||||||||||||||
Sbjct 7561 CCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325081678070621
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