Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq9095 109 4e-19 seq21475 105 4e-18 seq133270 104 2e-17 seq52194 98.7 6e-16 seq58137 89.7 3e-13 >seq9095 Length=14658 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || |||||||| || | ||||| |||| || ||||||||||||||||| Sbjct 6473 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCGGCGAA 6532 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||| || ||| | || | || |||||||| | || ||| || ||| Sbjct 6533 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTT 6592 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| || || || || | || ||||| || || || | || ||||| Sbjct 6593 TTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTAC 6652 Query 34966 AAAGATCTGCATGAT 34980 ||||| |||||||| Sbjct 6653 GAAGATTTGCATGAT 6667 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||| ||||| ||||| |||| |||| || ||||| ||||| ||||| Sbjct 5106 TCCTTCTGAATGTTGTAGTCTGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAA 5165 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | || |||||| | || | ||||||||| || | |||||| ||| || | Sbjct 5166 ATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTT 5225 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||| || |||| || || || || || || || || |||||| Sbjct 5226 TCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGCGTTTTTACA 5285 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 5286 AAAATTTGCAT 5296 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || |||||||| || | ||||| |||| |||||||||||||| ||||| Sbjct 5561 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAA 5620 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||| || || | || | || || ||||| | || ||| ||| || Sbjct 5621 AATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATT 5680 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| || || || || | ||| || || || || || || || || || Sbjct 5681 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 5740 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 5741 AAAAATTTGCAT 5752 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || || ||||| | || || ||||||||||| || || | Sbjct 6208 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 6267 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 6268 ATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6327 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | ||||| ||| || | | || | ||| | ||| | Sbjct 6328 GAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 6387 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || |||||||| || || ||||| Sbjct 6388 CTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 6436 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || || ||||||| || || ||||| || |||||||| || | | ||| || Sbjct 4626 CTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGTACGCCCA 4685 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||||||||||||| || || ||||||| ||| || ||| | || | || |||||| Sbjct 4686 TCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTG 4745 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||||| || || | |||| | ||| || || || || | || || Sbjct 4746 TCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 4805 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || |||||||| || || ||||| Sbjct 4806 GTTTTCCCAGTCAGTGTCTTTACGAAAATTTGCAT 4840 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || |||||||| || | ||||| |||| |||||||||||||| || || Sbjct 4877 CTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAA 4936 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||| || || | || | || || ||||| | || ||| ||| || Sbjct 4937 AATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATT 4996 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | ||| || || || || | ||| || || || || || || || || || Sbjct 4997 TTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCAC 5056 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 5057 AAAAATTTGCAT 5068 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| ||||| |||||||| || || |||| |||| || || || || || ||||| Sbjct 5334 TCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAA 5393 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| | || |||||| | || | || |||||||| | ||||| || || | Sbjct 5394 ATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACATTT 5453 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| || || || || | || || || || || || || ||||||||| Sbjct 5454 TCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACA 5513 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 5514 AAAATTTGCAT 5524 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || ||||| || || |||| |||| || || |||||||| || || Sbjct 5790 TCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 5849 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | ||| |||||| | || | || ||||| || | ||||| || || | Sbjct 5850 ATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTT 5909 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || || | || || || || || || || ||||||||| Sbjct 5910 TCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTTGCCAGTCAGTGTCTTTACA 5969 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 5970 AATATTTGCAT 5980 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || ||||| || | || ||||||||||| || ||||| | Sbjct 5980 TTCCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6039 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| ||| || ||| | | Sbjct 6040 ATAGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 6099 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | ||||| || || | | || | ||| || || | Sbjct 6100 GAATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6159 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || || || || || |||||||| || ||||| Sbjct 6160 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 6208 >seq21475 Length=13715 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | | || |||| || ||||| || || || ||| Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || ||||| || | ||||| ||| || | Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 10967 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| |||||| || || | ||| ||||| || ||||| |||||||| || Sbjct 10966 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 10907 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 10906 AAAATTTGCAT 10896 >seq133270 Length=334 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34796 ATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGT 34855 ||||| ||||| || ||| |||| |||| |||| |||||| ||||| ||||| || || Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61 Query 34856 TGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT 34915 ||||| || | || | ||||| ||||| | ||||| ||| || | | || | Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121 Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975 ||| || || || || | ||| ||||||||||| || ||||| || ||||| |||||| Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181 Query 34976 AT 34977 || Sbjct 182 AT 183 >seq52194 Length=4646 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| ||||| || || ||||| || ||| |||| |||| Sbjct 3905 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 3964 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||||||||| || |||||||| || ||||| || ||| | || | || ||||| || Sbjct 3965 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 4024 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | | || | || | ||| || || | ||||| || Sbjct 4025 TGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTT 4084 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || || ||||| || ||||| Sbjct 4085 TTTCCAGTAAGTGTTTTGACAAATATTTGCAT 4116 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||| |||||||| || ||||| || || | || |||| ||| Sbjct 3680 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCATCCTCC 3739 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| || || ||||| || ||| | || | ||||| ||||| | Sbjct 3740 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGG 3799 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||| || | | || | || || || || || | || || || || Sbjct 3800 ATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTC 3859 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||||||||||||||| Sbjct 3860 CCTGTGAGTGTCTTTACAAAGATCTGCAT 3888 >seq58137 Length=8097 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || || ||||| || ||||| || ||| |||| | || ||| Sbjct 7741 ACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCGTCTTCC 7682 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||| ||||| |||| ||||| || ||| | || | || |||||||| | Sbjct 7681 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 7622 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| || | | || | || | || || || | || ||||| || Sbjct 7621 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 7562 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || |||||||||||||| Sbjct 7561 CCCGTAAGTGTTTTCACAAAGATCTGCAT 7533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325081678070621