Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq58853 98.7 2e-15 seq59635 91.5 3e-13 >seq58853 Length=1972 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 143094 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTT 143153 |||||||| || |||||| | |||| || ||| |||| ||||| | || || ||| Sbjct 1422 GGTATATGTGACAATTTATTGACATGTACAGTGCGAGCGTGGGACTTCTCAAAGCCACTT 1481 Query 143154 ATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAACATATA 143213 | || ||||| || ||||| | ||||||||||||||||||||| ||||| ||| Sbjct 1482 GTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAATA 1541 Query 143214 GATGCTTTAAAACATATGGG-TTTCATAGAAATAGAATGCATAGaaaaaaaaC--TAGCC 143270 |||| |||||| || ||| ||||| |||||| | || | || ||||| || Sbjct 1542 GATGTTTTAAAGGATTGGGGCTTTCA-AGAAAT-TCCTCCA-ATAAGTAAAACTTTAATG 1598 Query 143271 TGCGGAGACATAGGAAATGGTGCTATGGCAGAAGTT 143306 || ||||| | ||| ||||| |||||||||| || Sbjct 1599 TGTGGAGATACAGGCGTTGGTGGTATGGCAGAAATT 1634 >seq59635 Length=4213 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/142 (75%), Gaps = 6/142 (4%) Strand=Plus/Minus Query 182420 AGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGTG 182479 ||||||| ||||||||| | || || ||||||| || ||||| ||| | ||||| | Sbjct 1575 AGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCCTCTGATAAACAGGAATATTCAG 1516 Query 182480 CAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT- 182538 ||||||| ||||||| || || | ||| ||| |||||||| | |||||||||||| Sbjct 1515 CAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTTACAGAATTTCCTC 1456 Query 182539 --GTTATACGTAAACACCCATA 182558 ||||| |||||| || || Sbjct 1455 CAGTTAT---TAAACATCCTTA 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901672596438240