Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq38911 86.0 8e-12
seq31600 86.0 8e-12
seq7010 86.0 8e-12
>seq38911
Length=4699
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4337 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4278
Query 8718 CCCGACG 8724
|||| ||
Sbjct 4277 CCCGCCG 4271
Score = 84.2 bits (92), Expect = 3e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 4338 GTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 4279
Query 11788 CCCCGACG 11795
||||| ||
Sbjct 4278 CCCCGCCG 4271
>seq31600
Length=2932
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 1453 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1512
Query 8718 CCCGACG 8724
|||| ||
Sbjct 1513 CCCGCCG 1519
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 1450 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 1509
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 1510 TTCCCCGCCG 1519
>seq7010
Length=9211
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 4311 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4370
Query 8718 CCCGACG 8724
|||| ||
Sbjct 4371 CCCGCCG 4377
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 4311 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 4370
Query 11789 CCCGACG 11795
|||| ||
Sbjct 4371 CCCGCCG 4377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 651588408342960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |