Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq89413 120 3e-22 seq4562 105 6e-18 seq52194 102 8e-17 seq9095 91.5 1e-13 >seq89413 Length=986 Score = 120 bits (132), Expect = 3e-22 Identities = 186/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853 |||| || ||||| || || |||||||| || || | | || ||||| || | Sbjct 721 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATA 780 Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913 || || || || | |||||||||||||||||| | || || |||||||| | ||| Sbjct 781 CCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGC 840 Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973 ||||| ||| ||||| | ||||| ||| | || || || || || || | Sbjct 841 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGC 900 Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033 ||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| || Sbjct 901 GGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 960 Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCC 25059 ||||| |||| | ||||||||||| Sbjct 961 AAAGGATTGTCTTCATGGAACGAGCC 986 >seq4562 Length=21325 Score = 105 bits (116), Expect = 6e-18 Identities = 433/680 (64%), Gaps = 6/680 (1%) Strand=Plus/Minus Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 ||||| |||||||| || || ||||||| | ||| || || || | || || ||||| Sbjct 20690 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 20631 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 |||| || || || ||||||||||| | ||| ||| || || || | ||| Sbjct 20630 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 20571 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490 |||||||| || | || || || |||||| || ||||| || || || |||| Sbjct 20570 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 20511 Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550 || || || || | || | |||||| | || | | || | ||| || || || Sbjct 20510 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 20451 Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610 || || || || || ||||| || || ||||| ||||| || || ||| Sbjct 20450 TCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 20391 Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670 |||||||| | || | || | ||||||||| || || | |||||| || || | ||| Sbjct 20390 CTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 20331 Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727 || || | ||| | || || || | ||| || || ||||| || Sbjct 20330 ATAGGTCTATGTCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAATTAACA 20274 Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787 || || | |||| | ||| | || | |||||| ||| | || |||| Sbjct 20273 TCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAA 20214 Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847 | | ||| || | | | | ||| | || || || || || |||||||| ||| Sbjct 20213 TTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 20154 Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACG 148907 ||||| | |||| | || | ||| | ||| |||||||| ||||| || | Sbjct 20153 ACTTCATCTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTG 20094 Query 148908 CCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCG 148967 || | || |||||||| ||||| ||||| || || ||||| |||| |||||| ||| Sbjct 20093 CCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 20034 Query 148968 CCAGTTTCCACCTGCGTTTC 148987 ||||| ||||| || | ||| Sbjct 20033 CCAGTCTCCACTTGGGCTTC 20014 >seq52194 Length=4646 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| |||||||| || | || ||| | ||||| ||||||||||| Sbjct 3692 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCA-TCCTCCAGCTGCTTGCC 3750 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || || || || || || || || ||||| |||| || |||| Sbjct 3751 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGGATC-TTGGCTT 3809 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || || | |||| ||||| || || || | Sbjct 3810 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTGAGTG 3869 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 3870 TCTTTACAAAGATCTGCAT 3888 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| |||||||| || || ||| | | | || || || Sbjct 3911 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAG 3969 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| | || || || || || || ||||| || |||||||| || ||| Sbjct 3970 TTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATC-TTGAA 4028 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 || |||| | | | |||| ||||||| ||||| || || | || | ||||| | Sbjct 4029 TCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTTC 4088 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || ||||| || || || ||||| Sbjct 4089 CAGTAAGTGTTTTGACAAATATTTGCAT 4116 >seq9095 Length=14658 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| ||||| || || || ||| | || ||||| ||||| || Sbjct 6468 GTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCG 6527 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| |||| || | || || || ||||| |||||||||||||| |||||| ||| Sbjct 6528 GCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTT 6587 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | ||||| || | |||| |||||| || || | |||| Sbjct 6588 ACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTT 6647 Query 133644 TTTACGAAAATCTGCATG 133661 |||||||| || |||||| Sbjct 6648 TTTACGAAGATTTGCATG 6665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482490462713160