Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq89413 120 3e-22
seq4562 105 6e-18
seq52194 102 8e-17
seq9095 91.5 1e-13
>seq89413
Length=986
Score = 120 bits (132), Expect = 3e-22
Identities = 186/266 (70%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853
|||| || ||||| || || |||||||| || || | | || ||||| || |
Sbjct 721 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATA 780
Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913
|| || || || | |||||||||||||||||| | || || |||||||| | |||
Sbjct 781 CCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGC 840
Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973
||||| ||| ||||| | ||||| ||| | || || || || || || |
Sbjct 841 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGC 900
Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033
||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| ||
Sbjct 901 GGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 960
Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCC 25059
||||| |||| | |||||||||||
Sbjct 961 AAAGGATTGTCTTCATGGAACGAGCC 986
>seq4562
Length=21325
Score = 105 bits (116), Expect = 6e-18
Identities = 433/680 (64%), Gaps = 6/680 (1%)
Strand=Plus/Minus
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
||||| |||||||| || || ||||||| | ||| || || || | || || |||||
Sbjct 20690 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 20631
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|||| || || || ||||||||||| | ||| ||| || || || | |||
Sbjct 20630 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 20571
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||||||| || | || || || |||||| || ||||| || || || ||||
Sbjct 20570 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 20511
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
|| || || || | || | |||||| | || | | || | ||| || || ||
Sbjct 20510 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 20451
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| || || || || ||||| || || ||||| ||||| || || |||
Sbjct 20450 TCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 20391
Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670
|||||||| | || | || | ||||||||| || || | |||||| || || | |||
Sbjct 20390 CTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 20331
Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727
|| || | ||| | || || || | ||| || || ||||| ||
Sbjct 20330 ATAGGTCTATGTCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAATTAACA 20274
Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787
|| || | |||| | ||| | || | |||||| ||| | || ||||
Sbjct 20273 TCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAA 20214
Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847
| | ||| || | | | | ||| | || || || || || |||||||| |||
Sbjct 20213 TTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 20154
Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACG 148907
||||| | |||| | || | ||| | ||| |||||||| ||||| || |
Sbjct 20153 ACTTCATCTTCTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTG 20094
Query 148908 CCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCG 148967
|| | || |||||||| ||||| ||||| || || ||||| |||| |||||| |||
Sbjct 20093 CCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 20034
Query 148968 CCAGTTTCCACCTGCGTTTC 148987
||||| ||||| || | |||
Sbjct 20033 CCAGTCTCCACTTGGGCTTC 20014
>seq52194
Length=4646
Score = 102 bits (112), Expect = 8e-17
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| |||||||| || | || ||| | ||||| |||||||||||
Sbjct 3692 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGACCA-TCCTCCAGCTGCTTGCC 3750
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| || || || || || || || || || ||||| |||| || ||||
Sbjct 3751 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCTTGGATC-TTGGCTT 3809
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||| | ||| || || || | |||| ||||| || || || |
Sbjct 3810 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTGAGTG 3869
Query 133642 TTTTTACGAAAATCTGCAT 133660
| ||||| || ||||||||
Sbjct 3870 TCTTTACAAAGATCTGCAT 3888
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| |||||||| || || ||| | | | || || ||
Sbjct 3911 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAG 3969
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| | || || || || || || ||||| || |||||||| || |||
Sbjct 3970 TTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATC-TTGAA 4028
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|| |||| | | | |||| ||||||| ||||| || || | || | ||||| |
Sbjct 4029 TCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTTC 4088
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || ||||| || || || |||||
Sbjct 4089 CAGTAAGTGTTTTGACAAATATTTGCAT 4116
>seq9095
Length=14658
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| ||||| || || || ||| | || ||||| ||||| ||
Sbjct 6468 GTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCGAGTTGCTTTCCG 6527
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| |||| || | || || || ||||| |||||||||||||| |||||| |||
Sbjct 6528 GCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTT 6587
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | || || | | ||||| || | |||| |||||| || || | ||||
Sbjct 6588 ACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTT 6647
Query 133644 TTTACGAAAATCTGCATG 133661
|||||||| || ||||||
Sbjct 6648 TTTACGAAGATTTGCATG 6665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482490462713160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |