Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 178 3e-39
seq4911 113 1e-19
>seq4562
Length=21325
Score = 178 bits (196), Expect = 3e-39
Identities = 428/644 (66%), Gaps = 13/644 (2%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| || || ||| ||| || || || ||| ||||||||||||| |||| || | |||
Sbjct 19480 TCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAA 19539
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634
|| ||| | ||||||||| |||| || || ||| || ||| || ||| | |
Sbjct 19540 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 19599
Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694
||||| || | | || || | || || | || | ||| || || ||||
Sbjct 19600 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCGAATGGTCTAGTGCCAA 19654
Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751
|||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | |
Sbjct 19655 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 19714
Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811
|| ||||||| || ||| | || ||||||||| | || |||||||||||||| || |
Sbjct 19715 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGACATATTTGAATTCTTGGATTTAA 19774
Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871
|| || ||| |||||| ||||| | || | |||||||| | |||||
Sbjct 19775 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 19834
Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931
||||| | || |||||| | || || || ||| | ||| ||| ||||||||||||
Sbjct 19835 CAGATCTGTTTATGAAAAGAGTAGAAAAAGATGAAGTTTGGAGTCTCATGTGTCCTCATG 19894
Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991
|||||| || |||| | |||| | || |||||||| | || |||||||
Sbjct 19895 ACAGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAATTATATACCAAATATG 19954
Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051
|| ||||| ||| |||||| | ||||||||| | ||| ||| | |
Sbjct 19955 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 20014
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
|| | ||||| || ||||| || || || || |||||||| ||| | ||| | ||
Sbjct 20015 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 20074
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|||||||| ||| | || || ||||| | ||| ||| | |||
Sbjct 20075 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 20118
>seq4911
Length=48505
Score = 113 bits (124), Expect = 1e-19
Identities = 347/520 (67%), Gaps = 34/520 (7%)
Strand=Plus/Minus
Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| |||
Sbjct 22394 CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 22335
Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100
||| |||| |||||||| |||||| || || ||| || || || || ||||||| ||
Sbjct 22334 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCC 22276
Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159
|||||| ||| ||||||| ||||| ||| | || | || ||| | |
Sbjct 22275 TCGCTCTATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 22217
Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217
|| || |||| |||| || |||||| ||| ||||||||||||| |||
Sbjct 22216 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 22164
Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275
| | | | || | ||| | ||| | ||| | || || ||| | || |||
Sbjct 22163 ATAGTTCGTGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG- 22109
Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327
|| ||| | ||| |||| |||| | | || |||| || | ||||
Sbjct 22108 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGATGACGATT 22055
Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387
|||| | |||||| | || ||| | |||| |||||| |||||||| ||| | || |
Sbjct 22054 TGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 21995
Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447
||||||| | | | |||||||| | ||| | ||| | |||| || ||||| |
Sbjct 21994 AAGTATTGCCGTGGTCCACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTG 21935
Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||||||| || || ||||||||| | ||||||||||||||
Sbjct 21934 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 21895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1184471693441599
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |