Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq9095 149 1e-30
seq52194 127 5e-24
seq58137 114 3e-20
seq133270 86.0 1e-11
>seq9095
Length=14658
Score = 149 bits (164), Expect = 1e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || ||||| |||||||||||||||||| |||||| ||| | |||
Sbjct 4825 AAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAATAGAAAAT 4766
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| || |||||||| || ||||| ||| || || |||||||| || ||
Sbjct 4765 GTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGACTGATTTTT 4706
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| |||||||| |||||||||| | || ||| | || || || |||||||||| |||
Sbjct 4705 GCTGGAAAGCAACTGGAAGATGGGCGTACATTGTCAGACTATAATATCCAGAAAGAATCT 4646
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||||||||| | |||||| ||
Sbjct 4645 ACTCTTCACCTTGTTCTCAGACTTAGA 4619
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| ||||| |||||||||||| |||||| ||| |||||
Sbjct 6649 AAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGATACAATCGAAAAC 6590
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| |||||||||||| || ||||| ||| || || |||||||| || |||
Sbjct 6589 GTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAAAGACTGATTTTC 6530
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| | |||||||| | || ||| | || || || ||||||| ||||||
Sbjct 6529 GCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCAGACTATAATATCCAGAAGGAGTCT 6470
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||| | ||| | || ||| | || ||
Sbjct 6469 ACTTTGCACTTGGTGTTGCGTCTACG 6444
Score = 120 bits (132), Expect = 7e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || |||||||| ||||| || |||||| ||| | |||
Sbjct 6421 AAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGAGCCTTCTGATACAATTGAAAAT 6362
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| ||||| || ||||| |||||| || || ||||||||||| ||
Sbjct 6361 GTTAAAGCGAAA-ATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAAAGACTTATTTT 6303
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| ||||||||| | ||||||||| | || | | ||||||||| | |||||||| ||
Sbjct 6302 TGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAACATTCAGAAAGAATC 6243
Query 206364 TACTCTTCACCTTGT 206378
|||| | ||||| ||
Sbjct 6242 TACTTTGCACCTAGT 6228
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||||| || || || ||||| ||||| |||||||||||| ||||||
Sbjct 6205 CAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCTGAT 6146
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | ||| || ||| || || || || ||||| || ||| || || |||
Sbjct 6145 ACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCAACAA 6086
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||| || || ||||||||| | ||||||||| | ||| | | || ||||| |
Sbjct 6085 AGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAATATT 6026
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || |||||| | || || ||
Sbjct 6025 CAGAAGGAATCTACTTTGCATCTGGT 6000
Score = 111 bits (122), Expect = 4e-19
Identities = 88/106 (83%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810
|| |||||| | |||||||||||||||||| |||||||||| ||||||||| | ||| ||
Sbjct 4619 TCTAAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGGATATTATAGTCTGACAATGT 4678
Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| ||||||||||| |||||||| || || || || | |||||||
Sbjct 4679 ACGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGA 4724
Score = 109 bits (120), Expect = 1e-18
Identities = 148/205 (72%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || || || ||||| |||||||||||||||||| |||||| ||| |
Sbjct 5516 TTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGATACAAT 5457
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||| || |||||||| || ||||| ||| || ||| || || ||
Sbjct 5456 AGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAGAGGCT 5397
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|| ||||| || || ||| | ||||||||| | ||| || | || || || | || ||
Sbjct 5396 GATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAATATTCAAAA 5337
Query 206358 AGAGTCTACTCTTCACCTTGTTTTG 206382
|| |||||| | ||| | ||| ||
Sbjct 5336 GGAATCTACTTTGCACTTAGTTCTG 5312
Score = 91.5 bits (100), Expect = 3e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || | ||| || | ||| | ||||||||| ||||||| ||||||||| | ||| ||
Sbjct 6444 CGTAGACGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTG 6503
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
| |||||||| || |||||||||||||| || || | |||||||
Sbjct 6504 CGCCCATCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGA 6548
Score = 86.0 bits (94), Expect = 1e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 204775 AGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 204834
||||||||| ||||||| ||||||||| | ||| || | ||||||||||| ||||||||
Sbjct 5555 AGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCC 5614
Query 204835 GGCGAAGATAAGCCGTTGTTGA 204856
||||| || || | |||||||
Sbjct 5615 AGCGAAAATCAGTCTTTGTTGA 5636
>seq52194
Length=4646
Score = 127 bits (140), Expect = 5e-24
Identities = 151/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| |||||| || || |||||||| || ||||||||||| || || |||
Sbjct 4113 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTAGAGCCATCCGAC 4054
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || ||||||||| || ||||||||| || || ||
Sbjct 4053 ACCATTGAAAATGTTAAAGCTAA-GATTCAAGATAAGGAAGGAATTCCTCCAGATCAACA 3995
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | ||||||||||| || ||||| |||||||||| | || || | || ||||| |
Sbjct 3994 ACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATAT 3935
Query 206352 CCAGAAAGAGTCTACTCTTCAC 206373
|||||||||||| || ||||||
Sbjct 3934 CCAGAAAGAGTCCACCCTTCAC 3913
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| ||| || || ||||| || || || ||| ||||||| || ||||||
Sbjct 4574 CAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGAGCCGTCTGAC 4515
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| |||||| ||||||||||| ||||| || ||| || || |||
Sbjct 4514 ACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAACAA 4455
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| |||||||| ||||| || ||| ||||||||||| | || || | || |||||| ||
Sbjct 4454 CGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAACATC 4395
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
|| || |||||||| |||||
Sbjct 4394 CAAAAGGAGTCTACCCTTCA 4375
Score = 102 bits (112), Expect = 2e-16
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || |||||||| ||||| ||||| || ||||| ||| || |||
Sbjct 3885 CAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCAGAC 3826
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || ||| ||||| ||||| |||||| || || ||
Sbjct 3825 ACTATTGAAAATGTTAAAGCCAA-GATCCAAGACAAAGAGGGAATTCCCCCAGATCAACA 3767
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| | || || ||||| || |||||| |||| ||||| | ||| | | || ||||| |
Sbjct 3766 ACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAATAT 3707
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTT 206381
||||||||||| ||| | ||| | || ||
Sbjct 3706 TCAGAAAGAGTCCACTTTGCACTTGGTATT 3677
Score = 96.9 bits (106), Expect = 8e-15
Identities = 74/88 (84%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828
|||||| || ||||||||||||| ||| ||||||| || || | ||||||||||| ||
Sbjct 3913 GTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 3972
Query 204829 CTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||| || ||||||||||| |||||||||
Sbjct 3973 CTTACCAGCGAAGATAAGACGTTGTTGA 4000
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||||||||| || || || ||||| |||||
Sbjct 3645 AAGACTCTTACTGGGAAGACCATCACTTTGGAGGTTGAGCCATCCGACACTATCGAAAAT 3586
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || || || ||| || ||| || | || |||||
Sbjct 3585 GTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAGCGTCTCATCTTT 3526
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || |||||||| ||||| | ||| || | ||||| ||| |||| ||||| |||
Sbjct 3525 GCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGATTATAACATCCAAAAAGAATCT 3466
Query 206365 AC 206366
||
Sbjct 3465 AC 3464
Score = 86.0 bits (94), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 204770 TGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 204829
||||| |||||||| || |||| || ||||| | || || | |||||||||||||||
Sbjct 4375 TGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTACGTCCATCTTCCAGCTGT 4434
Query 204830 TTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|| ||||| |||||||| |||||||||
Sbjct 4435 TTGCCGGCAAAGATAAGACGTTGTTGA 4461
>seq58137
Length=8097
Score = 114 bits (126), Expect = 3e-20
Identities = 164/228 (72%), Gaps = 5/228 (2%)
Strand=Plus/Plus
Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223
|||||| ||||| ||| ||||| || || || ||||| || ||||||||||| |||
Sbjct 7530 AAAATG---CAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 7586
Query 206224 AGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282
||| || || | ||| || ||||| ||| |||||||| || ||||| ||| ||
Sbjct 7587 CCTTCCGATACTATTGAAAATGTAAAAGCCAAA-ATTCAAGACAAGGAAGGCATTCCTCC 7645
Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342
|| ||| | | || ||||| |||||||| |||||||| ||| | || | | ||
Sbjct 7646 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGA 7705
Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| | || ||||| |||||||||||| | || ||| | |||||
Sbjct 7706 CTACAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCG 7753
>seq133270
Length=334
Score = 86.0 bits (94), Expect = 1e-11
Identities = 129/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| || || ||||| || || || ||||||||||| |||||
Sbjct 180 CAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTGAT 121
Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| ||||| || ||| |||||||| ||||| || || || || ||
Sbjct 120 ACTATTGAAAATGTAAAAGCTAAA-ATTCAAGACAAAGAGGGCATCCCTCCTGATCAGCA 62
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| |||||||| ||||| ||||| ||||||||||| | || || | || |||||| |
Sbjct 61 GCGTCTTATCTTTGCCGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACAT 2
Query 206352 C 206352
|
Sbjct 1 C 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179489540659239
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |