Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq133270 107 2e-18 seq52194 107 2e-18 seq21475 107 2e-18 seq58137 100 3e-16 seq9095 98.7 9e-16 seq89413 93.3 4e-14 >seq133270 Length=334 Score = 107 bits (118), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131942 ATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGC 132001 ||||||||||| || ||| || |||||| | || ||||||| | |||| |||||| Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61 Query 132002 TGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTA 132061 || ||||| ||||| ||||| ||||| || |||||| ||| | | ||| | |||| Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121 Query 132062 TCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGC 132121 || | || |||||||| | || | || || ||||| || ||||| | ||||||||| Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181 Query 132122 AT 132123 || Sbjct 182 AT 183 >seq52194 Length=4646 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | |||||||| || || |||||||| || ||| || |||||| Sbjct 3908 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 3967 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || ||||| | |||| ||||| |||||||||||||| || ||||| ||||| | Sbjct 3968 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 4027 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || ||| | | ||| | || |||| ||||| ||||| | || | ||||| Sbjct 4028 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTT 4087 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | || || ||||| Sbjct 4088 CCAGTAAGTGTTTTGACAAATATTTGCAT 4116 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| |||| || ||||| | | | ||||| ||||| ||||||||||| | |||| Sbjct 4357 CGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTA 4416 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| |||||||| |||| | |||| ||||| ||||||||||| || || || Sbjct 4417 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCC 4476 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| || || | | ||| | || || | |||||| ||||| | Sbjct 4477 TCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGA 4536 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || || || || | || || ||||| Sbjct 4537 GTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 || ||||| | | | || |||||||| ||||| || || || || || ||| || Sbjct 3452 ACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCC 3511 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||||||||| | | |||| ||||||||||| ||||| || ||||| || || || Sbjct 3512 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 3571 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | ||| | ||| |||| ||||| || || | || | || || Sbjct 3572 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTC 3631 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| || | ||| |||||||| Sbjct 3632 CCAGTAAGAGTCTTAACGAAGATCTGCAT 3660 >seq21475 Length=13715 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||||||||||||||| || ||||| |||||| || |||||||| | | Sbjct 11089 GATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCA 11030 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | ||| || || ||||| || || ||||| ||||| ||||| ||| | Sbjct 11029 AAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACA 10970 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | | |||||| |||| || | |||||||| || || || || Sbjct 10969 TTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTG 10910 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 10909 ACGAAAATTTGCAT 10896 >seq58137 Length=8097 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | || ||||||||||| |||||||| | ||| || Sbjct 7747 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCG 7688 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || || || | | || | ||| |||||||||||||| |||||||| || Sbjct 7687 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 7628 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | ||| | |||||||| || || ||||| | || | Sbjct 7627 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 7568 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || ||||| | || |||||||| Sbjct 7567 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533 >seq9095 Length=14658 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| || || || || ||||| || || ||| | Sbjct 6450 CGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 6509 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 |||||||| || || |||| | || || | |||||||||||||| |||||||| || Sbjct 6510 TCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 6569 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| || | | ||| | ||||| | | |||||||| | || | Sbjct 6570 TCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATG 6629 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 ||||| ||||| | |||||||| ||| || ||||||| Sbjct 6630 GTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGA 6666 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCG--AATCTT 131972 || ||||||| | || || || ||||||||||||| || || || ||| ||||| Sbjct 5088 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGT--CTGATAGTGTGCGTCCATCTT 5145 Query 131973 CGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGG 132032 | || ||||| || | | || || | |||||| ||||| || || || || ||||| Sbjct 5146 CAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTT 5205 Query 132033 TAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 ||||||| ||| | | ||| | || || | ||||| ||||| | || | |||| Sbjct 5206 GAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTT 5265 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || ||||||| ||||| ||||| Sbjct 5266 TACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || ||||| | | ||||| || || || || ||||| || || ||| | Sbjct 4854 CGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 4913 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | | || || | |||||||| ||||| ||||||||||| Sbjct 4914 TCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 4973 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| ||| | | ||| | || || | | |||||||| | || | Sbjct 4974 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5033 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| ||||| | ||||| ||||| Sbjct 5034 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || || || ||||| || |||||| |||||| || || || || | | Sbjct 4647 GATTCTTTCTGGATATTATAGTCTGACAATGTACGCCCATCTTCCAGTTGCTTTCCAGCA 4706 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | |||||||||||||| || ||||| || || |||||| || | Sbjct 4707 AAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACA 4766 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | | |||||||| | || | ||||| |||||||| || ||| Sbjct 4767 TTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTT 4826 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 4827 ACGAAAATTTGCAT 4840 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||||||||| || | || || |||||| ||||| || || | | Sbjct 6243 GATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCA 6302 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | || |||||||| || || || |||||||| |||||| ||| | Sbjct 6303 AAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACA 6362 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | ||||| ||||| | || | || || |||||||| || ||| Sbjct 6363 TTTTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTT 6422 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 6423 ACGAAAATTTGCAT 6436 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || ||||| | | ||||| || || || || ||||| || || ||| | Sbjct 5538 CGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 5597 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | || || | |||||||| ||||| ||||||||||| Sbjct 5598 TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 5657 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| ||| | | ||| | || || | | |||||||| | || | Sbjct 5658 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5717 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| ||||| | ||||| ||||| Sbjct 5718 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 >seq89413 Length=986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 208/307 (68%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 24784 GAAAATAACAAGCGTTTCGAG-AAACATCCCGATAAAATTGTAGCGGCTTACTTCGTCGA 24842 ||||| || |||| ||| || ||||||| || ||| |||| | || |||||||| || Sbjct 682 GAAAAAAATAAGCCGTTCAAGCAAACATCTGGA-AAAGTTGTGGGTGCCTACTTCGTAGA 740 Query 24843 GTGGGGCGTGTATCAGCGGCAGTTTTCCGTCGACAAAGTGCCCGCGCCCAATTTGTCGCA 24902 ||||| || |||| || | || |||| || | || || ||| | | || Sbjct 741 ATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTATACCTAATCTTACTCA 800 Query 24903 CTTGCTATACGCTTTCGTGCCGATATGCGGCGGCGAGGGCATAAACGACGCTCTCAAAAC 24962 |||||| |||| || | || || |||||||| || ||||| || || | | |||| Sbjct 801 CTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGATAGTTT-AAAAG 859 Query 24963 AGTTCCC-GGTAGTTTTGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGACGATTTTAAGG 25021 || || || ||||| | || || ||||| || || ||| || || || || || | Sbjct 860 AGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAAG 919 Query 25022 TAACCATTCACGACCCCTGGGCCGCCATCCAGAAACCGCAGAAAGGCGTCTCCACTTGGA 25081 | | || ||||| || ||||| || | || ||||| || ||||| | || | |||| Sbjct 920 TCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGA 979 Query 25082 ACGAGCC 25088 ||||||| Sbjct 980 ACGAGCC 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475693967703240