Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq133270 107 2e-18
seq52194 107 2e-18
seq21475 107 2e-18
seq58137 100 3e-16
seq9095 98.7 9e-16
seq89413 93.3 4e-14
>seq133270
Length=334
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 131942 ATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGC 132001
||||||||||| || ||| || |||||| | || ||||||| | |||| ||||||
Sbjct 2 ATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCGGCAAAGATAAGACGC 61
Query 132002 TGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTA 132061
|| ||||| ||||| ||||| ||||| || |||||| ||| | | ||| | ||||
Sbjct 62 TGCTGATCAGGAGGGATGCCCTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATAGTA 121
Query 132062 TCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGC 132121
|| | || |||||||| | || | || || ||||| || ||||| | |||||||||
Sbjct 122 TCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGC 181
Query 132122 AT 132123
||
Sbjct 182 AT 183
>seq52194
Length=4646
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | |||||||| || || |||||||| || ||| || ||||||
Sbjct 3908 ACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 3967
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| || ||||| | |||| ||||| |||||||||||||| || ||||| ||||| |
Sbjct 3968 AGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 4027
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || ||| | | ||| | || |||| ||||| ||||| | || | |||||
Sbjct 4028 ATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGCTCTACTTCCAAAGTTATTGTTTTT 4087
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || ||||| | || || |||||
Sbjct 4088 CCAGTAAGTGTTTTGACAAATATTTGCAT 4116
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| |||| || ||||| | | | ||||| ||||| ||||||||||| | ||||
Sbjct 4357 CGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAGGTA 4416
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| |||||||| |||| | |||| ||||| ||||||||||| || || ||
Sbjct 4417 CGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCC 4476
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|||||||| ||| || || | | ||| | || || | |||||| ||||| |
Sbjct 4477 TCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACTTCCAGA 4536
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | || || |||||
Sbjct 4537 GTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 4577
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|| ||||| | | | || |||||||| ||||| || || || || || ||| ||
Sbjct 3452 ACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGACAGAGTGCGGCCATCCTCC 3511
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
| ||||||||| | | |||| ||||||||||| ||||| || ||||| || || ||
Sbjct 3512 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 3571
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | ||| | ||| |||| ||||| || || | || | || ||
Sbjct 3572 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCAACCTCCAAAGTGATGGTCTTC 3631
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| ||||| || | ||| ||||||||
Sbjct 3632 CCAGTAAGAGTCTTAACGAAGATCTGCAT 3660
>seq21475
Length=13715
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||||||||||||||| || ||||| |||||| || |||||||| | |
Sbjct 11089 GATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCA 11030
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | ||| || || ||||| || || ||||| ||||| ||||| ||| |
Sbjct 11029 AAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACA 10970
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | |||||| | | |||||| |||| || | |||||||| || || || ||
Sbjct 10969 TTTTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTG 10910
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 10909 ACGAAAATTTGCAT 10896
>seq58137
Length=8097
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | || ||||||||||| |||||||| | ||| ||
Sbjct 7747 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCG 7688
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | || || || | | || | ||| |||||||||||||| |||||||| ||
Sbjct 7687 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 7628
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||| | | ||| | |||||||| || || ||||| | || |
Sbjct 7627 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 7568
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| || || ||||| | || ||||||||
Sbjct 7567 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533
>seq9095
Length=14658
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | ||||| || || || || ||||| || || ||| |
Sbjct 6450 CGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 6509
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|||||||| || || |||| | || || | |||||||||||||| |||||||| ||
Sbjct 6510 TCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 6569
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| ||| || | | ||| | ||||| | | |||||||| | || |
Sbjct 6570 TCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATG 6629
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125
||||| ||||| | |||||||| ||| || |||||||
Sbjct 6630 GTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGA 6666
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCG--AATCTT 131972
|| ||||||| | || || || ||||||||||||| || || || ||| |||||
Sbjct 5088 ACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGT--CTGATAGTGTGCGTCCATCTT 5145
Query 131973 CGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGG 132032
| || ||||| || | | || || | |||||| ||||| || || || || |||||
Sbjct 5146 CAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTT 5205
Query 132033 TAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092
||||||| ||| | | ||| | || || | ||||| ||||| | || | ||||
Sbjct 5206 GAATTTTTGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTT 5265
Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || ||||||| ||||| |||||
Sbjct 5266 TACCAGTAAGCGTTTTTACAAAAATTTGCAT 5296
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| || ||||| | | ||||| || || || || ||||| || || ||| |
Sbjct 4854 CGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 4913
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| || || || || | | | || || | |||||||| ||||| |||||||||||
Sbjct 4914 TCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 4973
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| ||| ||| | | ||| | || || | | |||||||| | || |
Sbjct 4974 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5033
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| |||||||| ||||| | ||||| |||||
Sbjct 5034 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || || || ||||| || |||||| |||||| || || || || | |
Sbjct 4647 GATTCTTTCTGGATATTATAGTCTGACAATGTACGCCCATCTTCCAGTTGCTTTCCAGCA 4706
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || | |||||||||||||| || ||||| || || |||||| || |
Sbjct 4707 AAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCCTTAACA 4766
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | | |||||||| | || | ||||| |||||||| || |||
Sbjct 4767 TTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTT 4826
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 4827 ACGAAAATTTGCAT 4840
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| ||||||||||| || | || || |||||| ||||| || || | |
Sbjct 6243 GATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCA 6302
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || || | || |||||||| || || || |||||||| |||||| ||| |
Sbjct 6303 AAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACA 6362
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||||| | ||||| ||||| | || | || || |||||||| || |||
Sbjct 6363 TTTTCAATTGTATCAGAAGGCTCAACTTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTT 6422
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 6423 ACGAAAATTTGCAT 6436
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| || ||||| | | ||||| || || || || ||||| || || ||| |
Sbjct 5538 CGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 5597
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| || || || || | | || || | |||||||| ||||| |||||||||||
Sbjct 5598 TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 5657
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| ||| ||| | | ||| | || || | | |||||||| | || |
Sbjct 5658 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5717
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| |||||||| ||||| | ||||| |||||
Sbjct 5718 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
>seq89413
Length=986
Score = 93.3 bits (102), Expect = 4e-14
Identities = 208/307 (68%), Gaps = 4/307 (1%)
Strand=Plus/Plus
Query 24784 GAAAATAACAAGCGTTTCGAG-AAACATCCCGATAAAATTGTAGCGGCTTACTTCGTCGA 24842
||||| || |||| ||| || ||||||| || ||| |||| | || |||||||| ||
Sbjct 682 GAAAAAAATAAGCCGTTCAAGCAAACATCTGGA-AAAGTTGTGGGTGCCTACTTCGTAGA 740
Query 24843 GTGGGGCGTGTATCAGCGGCAGTTTTCCGTCGACAAAGTGCCCGCGCCCAATTTGTCGCA 24902
||||| || |||| || | || |||| || | || || ||| | | ||
Sbjct 741 ATGGGGTGTCTATCCTAGGAAATTCCCCGTAGATCGTATACCTATACCTAATCTTACTCA 800
Query 24903 CTTGCTATACGCTTTCGTGCCGATATGCGGCGGCGAGGGCATAAACGACGCTCTCAAAAC 24962
|||||| |||| || | || || |||||||| || ||||| || || | | ||||
Sbjct 801 CTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGATAGTTT-AAAAG 859
Query 24963 AGTTCCC-GGTAGTTTTGAGGCGCTGCAGCGCTCGTGCGCCGGGCGCGACGATTTTAAGG 25021
|| || || ||||| | || || ||||| || || ||| || || || || || |
Sbjct 860 AGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAAG 919
Query 25022 TAACCATTCACGACCCCTGGGCCGCCATCCAGAAACCGCAGAAAGGCGTCTCCACTTGGA 25081
| | || ||||| || ||||| || | || ||||| || ||||| | || | ||||
Sbjct 920 TCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGA 979
Query 25082 ACGAGCC 25088
|||||||
Sbjct 980 ACGAGCC 986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475693967703240
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