Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq89413 167 2e-36
seq4562 114 1e-20
seq9095 109 5e-19
seq52194 104 2e-17
seq58137 84.2 2e-11
>seq89413
Length=986
Score = 167 bits (184), Expect = 2e-36
Identities = 204/277 (74%), Gaps = 1/277 (0%)
Strand=Plus/Plus
Query 59918 TGGATAAAGTCGTTGCCGCATATTTTGTCGAATGGGGTGTTTATCCTAGAAATTTTCCTG 59977
|||| ||||| || | || || || || ||||||||||| |||||||| || || || |
Sbjct 711 TGGA-AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCG 769
Query 59978 TAGATCGAGTGCCCACTCCTAATCTATCGCATATTCTATACGGATTTATTCCGATATGCG 60037
||||||| | || | |||||||| | || | || ||||| |||||||| || ||||
Sbjct 770 TAGATCGTATACCTATACCTAATCTTACTCACTTGCTCTACGGCTTTATTCCAATTTGCG 829
Query 60038 GCGGCGACGGTATCAACGACAGTCTTAAAACCATAACCGGTAGTTTCGAAGCGCTTCAGC 60097
|||| ||||| ||||| || ||| | ||| || || |||||| |||| || ||||
Sbjct 830 GCGGTGACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGC 889
Query 60098 GATCGTGTTCAGGTCGAGACGACTTTAAAGTATCAATTCACGATCCATGGGCCGCCGTCC 60157
| || ||| || || || ||||| ||||| ||||| |||||||||||||| || | |
Sbjct 890 GGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTAC 949
Query 60158 AGAAACCCCAAAAACAAGTAACCGCTTGGAACGAACC 60194
| ||||| |||||| | | | | |||||||| ||
Sbjct 950 AAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCC 986
>seq4562
Length=21325
Score = 114 bits (126), Expect = 1e-20
Identities = 668/1046 (64%), Gaps = 39/1046 (4%)
Strand=Plus/Minus
Query 136972 AGATGCTGATTTACTACTTGATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTA 137031
||||| || || ||||| || |||| || |||| ||||| | | ||| | |||
Sbjct 20750 AGATGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGAT 20691
Query 137032 GTGAACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATG 137091
|| || || || || ||||| |||| || | ||| |||||||| | || ||||||||
Sbjct 20690 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 20631
Query 137092 TAAGCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTC 137151
||| ||||| | ||||| || ||||| ||| || | | || || || | |
Sbjct 20630 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 20571
Query 137152 CAGTTCCACAGAT-TGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCG 137210
|||| ||| || | ||| || ||| | | ||||| |||| |||| | | || |
Sbjct 20570 CAGTCCCAAAGGTCTGTAGGA----GTTTTGTCCCACATATCATACTGGAGGATACCTTG 20515
Query 137211 ACTTGCAGGACTTTCTGCATAAGAATCATATGTTCCGTGCAGTTTC-GCCAGTTCAATAC 137269
||||| ||||| || ||| | |||| || | | |||| || | |||| ||
Sbjct 20514 GCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTT-CTTTTTCAGCTAATTCACAAC 20456
Query 137270 TCTGGACTAGTGCGCCATAGTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTT 137329
| ||||||| ||||| ||||||||||| | |||| | ||| | | | ||||
Sbjct 20455 TAGCTTCTAGTGCACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTT 20396
Query 137330 CTTGGCTGTCGTAGGGCATATCCAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGA 137389
| || ||||| | || || | | || |||||||| | || |||| ||| |
Sbjct 20395 TCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAA 20336
Query 137390 TACCGATAGGTCTGTGTTTAAAATTTGATATTTGAGCGCTAACAAGCGGATAAAAGTTTG 137449
|||| |||||||| ||| | | |||||| ||| || | | |||||||| ||
Sbjct 20335 TACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAA 20276
Query 137450 CGTCTATAATTCTATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGA 137509
| || |||| | | || | ||| | ||| || | | | | || | | || |
Sbjct 20275 CATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAA 20216
Query 137510 AATCGAAGCTTTTAGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGC 137569
||| || || ||| || | | |||| | || | || || || || | |||||
Sbjct 20215 AATTAAATCTGTTA------TTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGC 20162
Query 137570 ATACGGCCGTTTC-TGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTT 137628
| || ||| ||| | | || | ||||||| |||| || | |||||||||||| |
Sbjct 20161 ACACTGCCACTTCATCTTCTGAAG-TGTATTGCACAACCTCTGTGCAAAGATTGCTACAT 20103
Query 137629 CGGATCACTCCCAA-ATTCTTTTGATT-GTTTTTCTCGTTGACGTG-ATCTTTATATATC 137685
|| | | |||| ||| |||||||| | ||||| ||| || | ||| ||||| | |
Sbjct 20102 TTAAT-AGTGCCAAGATTTTTTTGATTACTCTTTCT-GTT-ACAAGCATCCTTATACAAC 20046
Query 137686 ATATACGGAGTTCCGGTTTCGACTTGAGTCTCAACAATT--TTTCTGTGAAGATCCAACG 137743
|| || || || || || || ||||| | || | |||| ||| | | || |
Sbjct 20045 ATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCAT--AACTCTTGAG 19988
Query 137744 CCATAATTTGTTCTCTAAA---CTTGCCTTGAGCTTCAAAACTTTCG--TATAGCCGTTT 137798
| | | ||||| | |||| || ||| ||||| | ||| | |||| ||
Sbjct 19987 CTCTGACTTGTTTTATAAATCGTTTTTCTT---CTTCATA--TTTGGTATATAATTCTTC 19933
Query 137799 AAATTTTTCGCCCATAACAATC-GTTAGACCCGGACACTCGTCGGGACACATCA-ACGAC 137856
||||| || ||| | || || | || || |||| || | |||||||| | || |
Sbjct 19932 AAATTCCTC-TCCAAAGCAGTCAGCGAGGCCAGGACTGTCATGAGGACACATGAGACTCC 19874
Query 137857 CATTTTCCTCCCGTCCTAACCCTTTCCATGAACAGAGAAGGCGTCCATATAGCAAAAAGA 137916
| ||| || | || || |||| ||| |||||| || |||||| |||| |||
Sbjct 19873 AAACTTCATCTTTTTCT-ACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAAC 19815
Query 137917 AGGTCGCGAGCCTTCATATCTTCGGCGCCCATATTGCGTTTTAAATCCaaaaaagtaaaa 137976
|| || | ||| |||| ||||| || | || ||||||||||| || |||
Sbjct 19814 AGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAAT 19755
Query 137977 aTATCAGCATGCCAAGGCTCGATATA 138002
|| || |||||||||||||| | |||
Sbjct 19754 ATGTCCGCATGCCAAGGCTCTAAATA 19729
>seq9095
Length=14658
Score = 109 bits (120), Expect = 5e-19
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
|| ||||||| | || |||||||| ||||| || ||| | ||||| | ||||| |||||
Sbjct 6668 CATCATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGC 6609
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
||||| ||||| | ||||| ||| ||| || || || || || || || ||
Sbjct 6608 TTCTGATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGA 6549
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGAT 25348
||| |||||||| |||| || ||| || ||||||||||||| | | ||||| ||
Sbjct 6548 TCAACAAAGACTGATTTTCGCCGGAAAGCAACTCGAAGATGGGCGCACATTGTCA--GAC 6491
Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|| ||||| || || || || || | || || |||||
Sbjct 6490 TATAATATCCAGAAGGAGTCTACTTTGCACTTGGTGTT 6453
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | |||||||||||| | || || ||| | ||||| | ||||| |||||
Sbjct 6208 ATGCAAATATTTGTAAAAACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 6149
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || || | || || ||||| ||||||||||| || || || |||||
Sbjct 6148 GATACAATTGAAAATGTTAAGGCGAAAATCCAGGATAAAGAGGGCATTCCCCCAGATCAA 6089
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||||| |||| | || || || || ||||||| | | | | || ||||||
Sbjct 6088 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAAT 6029
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||| || ||||| || | ||| | || || | ||||||| ||||
Sbjct 6028 ATTCAGAAGGAATCTACTTTGCATCTGGTACTACGGCTGAGAGGTGGAA 5980
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| |||||| | || || ||| | || || | ||||| |||||
Sbjct 5068 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 5009
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || ||| ||| ||| || ||||| || || || || |||||
Sbjct 5008 GACACAATCGAAAATGTTAAAGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 4949
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||||| |||| | || || ||||| ||||||| | | |||||| | || |
Sbjct 4948 CAAAGACTGATTTTTGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAG--ACTATA 4891
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
|||| || || || || || | ||||||||||| | | ||||| ||||
Sbjct 4890 ATATCCAGAAGGAGTCTACTTTGCATTTAGTGTTGCGTCTAAGAGGTGGAA 4840
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || ||||| ||| | || || || | ||||| | ||||| || ||| |
Sbjct 6436 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTAGAAGTTGA-GCCTTC 6378
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
||||| || || | || ||| |||||| ||||||||||| || || || |||||
Sbjct 6377 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 6318
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||||||||| |||| | || || || || ||||||| | | | ||||||||
Sbjct 6317 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAA 6258
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||| |||||||| || | || |||| || | ||||||| ||||
Sbjct 6257 CATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGAA 6208
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | |||||||| ||| | || || ||| | ||||| | ||||| |||||
Sbjct 5524 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 5465
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || || | || || |||||| || || || ||||| || || || ||
Sbjct 5464 GATACAATAGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 5405
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| || || |||| || |||||||| || ||||||| | | | | || || |||
Sbjct 5404 CAGAGGCTGATTTTCGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAAT 5345
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383
|||||||| ||||| || | || |||||
Sbjct 5344 ATTCAAAAGGAATCTACTTTGCACTTAGT 5316
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||||||||| | || || ||| | || || | ||||| | |||| |
Sbjct 5296 ATGCAAATTTTTGTAAAAACGCTTACTGGTAAAACTATTACTCTTGAAGTTG-AGCCTTC 5238
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | || ||| ||||||| ||||| ||||| || || || || ||
Sbjct 5237 TGACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCCCCAGACCA 5178
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTAC 25351
|| || || |||| || || |||||||| ||||||| | | | ||| || |||
Sbjct 5177 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTATCA--GACTAC 5120
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| ||||| || ||||| || | |||||||| | | ||||||| ||
Sbjct 5119 AACATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 5070
>seq52194
Length=4646
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | |||||||| ||| | || || ||| | ||||| | ||||| ||| ||
Sbjct 3888 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 3829
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| || || || |||||||| || || || |||||
Sbjct 3828 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGATCAA 3769
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
||| | ||||||| || ||||| || || || |||| | | | | || || ||||||
Sbjct 3768 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGTCGTACTCTCTCTGACTACAAT 3709
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
||||| ||||| ||||| | || || || ||| | || |||||||
Sbjct 3708 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 3662
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | ||||| || ||| |||| || || | || || | ||||| || ||| |
Sbjct 4577 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTAGA-GCCGTC 4519
Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|| || || || | ||||| || ||| |||||||||||||| || || |||||
Sbjct 4518 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 4459
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||| | || || | | ||||||||| || ||||||| | | | || |||||
Sbjct 4458 ACAACGTCTTATCTTTGCCGGCAAACAGCTGGAAGATGGACGTACCTTATCGGACTACAA 4399
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGT 25383
|| ||||| || || ||| ||||||||||
Sbjct 4398 CATCCAAAAGGAGTCTACCCTTCATTTAGT 4369
>seq58137
Length=8097
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | ||||| |||||| | || || ||| | || || | ||||| ||| |
Sbjct 7529 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 7588
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
||||||||| || | |||||| |||||| || || || || || || || ||
Sbjct 7589 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 7648
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
||| ||| | | |||| || || || ||| | ||||| | | | | || ||
Sbjct 7649 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACCCTTTCTGACTA 7708
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386
|||||||||||||||||| || |||| || || ||
Sbjct 7709 CAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 7744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444237821390880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |