Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1015 129 8e-24 seq4682 96.9 5e-14 >seq1015 Length=2426 Score = 129 bits (142), Expect = 8e-24 Identities = 171/234 (73%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| |||||||| || || ||||| |||| ||| |||| |||| | Sbjct 2234 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGCG 2181 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| || Sbjct 2180 ATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--GT 2123 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || ||||||| | ||||||| | | ||| | |||||| ||| Sbjct 2122 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 2063 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| |||||| |||||| |||||||||| ||| ||||||| Sbjct 2062 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 2009 >seq4682 Length=19110 Score = 96.9 bits (106), Expect = 5e-14 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| ||| | |||||||| ||||| || |||| ||| || | ||| || Sbjct 16690 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 16743 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || ||||||||||| || | || ||||||| ||||||| Sbjct 16744 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTTGAACGCATCGCGGCCGAGGCGTCC 16803 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || ||||||| | |||||| || | || | |||||| |||| Sbjct 16804 CGTCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 16863 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || | | |||||| || || | ||||| ||| |||||| || Sbjct 16864 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCTGTCAGCGAGGGAAC 16913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7162961571473358