Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1015 129 8e-24
seq4682 96.9 5e-14
>seq1015
Length=2426
Score = 129 bits (142), Expect = 8e-24
Identities = 171/234 (73%), Gaps = 10/234 (4%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| |||||||| || || ||||| |||| ||| |||| |||| |
Sbjct 2234 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGCG 2181
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| ||
Sbjct 2180 ATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--GT 2123
Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
||| || || | || ||||||| | ||||||| | | ||| | |||||| |||
Sbjct 2122 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 2063
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || | ||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 2062 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 2009
>seq4682
Length=19110
Score = 96.9 bits (106), Expect = 5e-14
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| ||| | |||||||| ||||| || |||| ||| || | ||| ||
Sbjct 16690 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 16743
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| || ||||||||||| || | || ||||||| |||||||
Sbjct 16744 ATGTCTATAATGAATTCCTTTGTCAACGATATTTTTGAACGCATCGCGGCCGAGGCGTCC 16803
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| ||||||| || ||||||| | |||||| || | || | |||||| ||||
Sbjct 16804 CGTCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 16863
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || | | |||||| || || | ||||| ||| |||||| ||
Sbjct 16864 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCTGTCAGCGAGGGAAC 16913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7162961571473358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |