Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq58137 113 4e-20
seq9095 107 2e-18
seq21475 86.0 6e-12
>seq58137
Length=8097
Score = 113 bits (124), Expect = 4e-20
Identities = 167/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | ||| ||||| || | ||| || |||||||| ||||| || |
Sbjct 7761 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAG 7702
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| ||| || |||| |||| ||||| || || || ||||| || || || || | ||
Sbjct 7701 AAAGGGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 7642
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || |||||||| ||| ||| |||| | | || | | || ||| | |||
Sbjct 7641 GAATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 7583
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| |||| || || ||||||||||| | ||||||||||| ||||||||| ||
Sbjct 7582 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 7529
>seq9095
Length=14658
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || | |||||| ||||| || ||| |||||| || || || || || |
Sbjct 4840 TTCCACCTCTTAGACGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 4899
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| || ||| | || ||||| ||||| || ||||| |||| | || || || | ||
Sbjct 4900 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAG 4959
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| || || |||||| |||||| || | | || | | ||||| | |||||
Sbjct 4960 GAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCA 5019
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || | || || ||||| || |||| ||||||||||| || |||||
Sbjct 5020 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || | ||| || ||||| || ||| |||||| || || || || || |
Sbjct 5524 TTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 5583
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| || ||| | || ||||| ||||| || || || |||| | || || || | ||
Sbjct 5584 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAG 5643
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| || || |||||| |||||| || | | || | | ||||| | |||||
Sbjct 5644 GAATGCCTTCTTTGTCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCA 5703
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| || | || || ||||| || |||| ||||||||||| || |||||
Sbjct 5704 CTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || || || || || || || ||| ||||||||||| || || || | |
Sbjct 5298 CCACCTCTTAGCCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGAC 5357
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || ||||| || || || || |||| || ||| ||||| | ||||
Sbjct 5358 AGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGA 5417
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | ||| | | || | | || || | ||||||
Sbjct 5418 ATACCTTCCTTGT-CTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 5476
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||| ||||| ||||| || |||| || || ||||| || |||||||
Sbjct 5477 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATTC 5526
>seq21475
Length=13715
Score = 86.0 bits (94), Expect = 6e-12
Identities = 138/196 (70%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| || | ||| || || | || || || || ||||| |||||
Sbjct 11086 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 11027
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
||||| || |||||||| | |||| | ||||| || ||| ||| || || | | |
Sbjct 11026 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGAT-TTTAGCTTTTACATT 10968
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | || || | |||||||| | || || ||||||||||| | || || ||
Sbjct 10967 TTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 10908
Query 35725 AAATATCTGCATTCTG 35740
|| || |||||| ||
Sbjct 10907 GAAAATTTGCATTGTG 10892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449926053351720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |