Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4562 605 4e-168
seq7375 91.5 2e-13
seq7176 86.0 9e-12
>seq4562
Length=21325
Score = 605 bits (670), Expect = 4e-168
Identities = 1122/1629 (69%), Gaps = 23/1629 (1%)
Strand=Plus/Minus
Query 68354 TTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGAT 68413
|||||||| | || || | ||||||||||| | | ||| |||||||| |||| |
Sbjct 21100 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 21041
Query 68414 AGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG 68473
||||||| || ||||| | ||| | |||| ||| |||||| || || |||||
Sbjct 21040 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 20981
Query 68474 AATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTC 68533
||| | || | || | ||| || || | ||||||||||| || || ||||||||||
Sbjct 20980 CATAGTTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTC 20921
Query 68534 TATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAAT 68591
|||| || ||||| | ||| | || | | ||| ||||| | || | || ||||
Sbjct 20920 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 20861
Query 68592 CTGTTTGATATCATCTGGAAGGCT---CGTATTTTGAATGGATCCACCATCGGATATAAT 68648
|| || || || | |||| | | | ||| || |||||| | | |||||||
Sbjct 20860 CTCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAAT 20803
Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708
| || || || || |||| |||||| | | || ||| | | || ||||| |
Sbjct 20802 AAGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 20743
Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768
|| |||| ||||||| |||||||| ||||| | ||||||||| ||| | ||
Sbjct 20742 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 20683
Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828
||| | ||||||| | || || |||||||| ||||| || ||||| |||||||| || |
Sbjct 20682 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTAT 20623
Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
||||| | ||| | | ||||||| || || || ||||| || ||| |||||
Sbjct 20622 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCA 20563
Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948
||| || | || | ||| | ||| || || || || || | ||||| |
Sbjct 20562 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGAC 20504
Query 68949 TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATG 69007
||| || |||||| || | ||||| | |||||||| ||||||||| || |||| ||
Sbjct 20503 TCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTG 20444
Query 69008 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGA 69067
|||| |||||||| ||||| || || | | ||||||| | ||||| ||| |||
Sbjct 20443 CACCATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 20384
Query 69068 ATGGATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
| |||| | | | | | ||| |||||||||| |||||||| |||||||| ||||||
Sbjct 20383 A-AGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 20325
Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186
||||||||| |||||||| ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 20324 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 20265
Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|| || | |||| | ||| | || | || |||| ||| ||||| |||||
Sbjct 20264 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG 20205
Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCA--T 69304
|| | ||||||||| || ||||||| || || || || || ||||| || ||| |
Sbjct 20204 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCT 20145
Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364
| | || ||||| | | |||||| || ||||| |||||||| ||||| || ||||
Sbjct 20144 TCTGAAGTG--TATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 20087
Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424
||| |||||||||||| ||||||| || ||||| || | || | || |||||||| |
Sbjct 20086 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 20027
Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAA 69483
| | || | ||| ||||| || ||||| | || || | | | | || || || |||
Sbjct 20026 CCACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATAA 19970
Query 69484 --CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA-TCA 69540
|| || |||| |||||||| ||||||| ||| ||||| ||| || || || |||
Sbjct 19969 ATCGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCT-CCAAAGCAGTCA 19911
Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600
| | ||||||| |||| |||||||| | ||| || ||||| | | |||| |
Sbjct 19910 GCGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTTTTCTACTCTT 19851
Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660
|||||||| ||||| || ||||| | ||| ||| || ||||| | ||| |||||||
Sbjct 19850 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 19791
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| ||||| || || || | ||| | || || | || || | |||||| || |||| |
Sbjct 19790 TTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAA 19731
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| || || | | || || ||||| ||||| || ||||||| ||||||||||| ||
Sbjct 19730 TAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 19671
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||||| ||||||| ||| || | | |||||| || ||||| || |||| || |||
Sbjct 19670 TTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTAA 19611
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
|| || | || | || || |||||| || || || |||||| |||
Sbjct 19610 GAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 19551
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
| ||||| |||| || || ||| | ||||| || |||||||| ||| |||| | |
Sbjct 19550 AATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATA 19491
Query 69961 AGAAAACAG 69969
|| ||||||
Sbjct 19490 AGGAAACAG 19482
Score = 100 bits (110), Expect = 4e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194
||||| ||||| ||||||| |||||| |||||| |||||| || |||||||||||||||
Sbjct 18969 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 18910
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
||| ||||| || |||| ||| |||| | || ||| ||||| | |||
Sbjct 18909 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 18860
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404
|| || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||
Sbjct 18225 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 18166
Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464
||||| | ||| || ||||||||| ||||| ||||||| |||| | || ||||
Sbjct 18165 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 18106
Query 70465 GTAACTCCGTtatata 70480
|| || || |||||
Sbjct 18105 GTTACACCAGAATATA 18090
>seq7375
Length=9560
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | |
Sbjct 3667 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 3608
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|||||||| ||||||| ||||| || ||||| ||
Sbjct 3607 CATATATCTGGATATTGGATTGGGAATATAACGAA 3573
>seq7176
Length=6331
Score = 86.0 bits (94), Expect = 9e-12
Identities = 244/370 (66%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551
||||||| || ||||| || ||| |||| ||| | ||| | || ||| | | ||| |
Sbjct 2579 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 2636
Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611
||||||| |||| ||| |||||| | || | ||||||||||| ||||| || |||||
Sbjct 2637 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 2696
Query 162612 TCATAAAAACAATAACAAGTTTGCGTTCTTTAGTAGAAACATGAAACCCGTTTTACAACA 162671
|||||||| || |||| | ||| | | | ||||| || | ||
Sbjct 2697 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 2756
Query 162672 CAAAGTTGATTATCTAAAAGAATACCTTCCCATAGCA-TTCAAAAAAGCTACATCTATTA 162730
||||||| | || | ||||| || | |||| |||| ||| ||| | | || | |
Sbjct 2757 CAAAGTTAGTCATTTTAAAGATTATTTGCCCAAAGCATTTCCTAAAGGAGATGACT-TGA 2815
Query 162731 TCTTGGATTCTGAAATTGTTCTAGTCGACGAACATAATG---TACCACTTCCGTTTGGAA 162787
|||||||| ||||| | || | || || | ||| || |||| | || || || |
Sbjct 2816 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2875
Query 162788 GTTTAGGAATACATAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTGTTTG 162847
||||| || || ||| | ||||| |||| | || | | || || | | ||||
Sbjct 2876 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 2935
Query 162848 ATTGTTTATA 162857
|||| |||||
Sbjct 2936 ATTGCTTATA 2945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 685586852600760
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