Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2
02015-12-17] 153,959 sequences; 293,608,641 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq7375 93.3 3e-14
seq10593 91.5 1e-13
seq13339 84.2 2e-11
>seq7375
Length=9560
Score = 93.3 bits (102), Expect = 3e-14
Identities = 140/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||||||||| ||||| |||||||| || ||||||||||| | | | || |
Sbjct 3813 GACTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCAT--GTCT 3870
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || ||||| || || | |
Sbjct 3871 TAGCATTCTTTGCAGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTCTCAC 3930
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||| ||||||||||| || ||||||
Sbjct 3931 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 3990
Query 43974 TTCATTCGGAAATGTAC 43990
||||||| || ||||||
Sbjct 3991 TTCATTCAGAGATGTAC 4007
>seq10593
Length=35691
Score = 91.5 bits (100), Expect = 1e-13
Identities = 111/146 (76%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | ||||| ||| || ||
Sbjct 20382 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGTGTTAAGCCCTC 20441
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCG- 115148
| ||| |||||||| || | || ||| ||| |||||||| |||||||||||| ||
Sbjct 20442 GCATGTAAACGGCATATC-TTCTTGTCGATACTGGATTCCACAGGTTCCTTTTTGACCGT 20500
Query 115149 GTAAACGATGCAAATTTATCACCAAT 115174
|| | || ||||| ||||| |||||
Sbjct 20501 GTCGA-GAAGCAAACTTATCTCCAAT 20525
>seq13339
Length=12762
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||||||||||||||||| |||| || | |||||||| ||| || |||| ||||
Sbjct 132 CCCAAAATTGTAAATGGTCCACAAATTTTGGACAAATATGTCGGTGAAAGTGAAGCAAAT 73
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529
| | | ||||||||||| || ||||||||| | |||||
Sbjct 72 ATTAGGAGATTGTTTGCTGATGCCGAAGAAGAAGAGAAACG 32
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396710223373795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |