Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20pardalinus_20sergestus_20[genbank_20GCA_5F001486225.1_2 02015-12-17] 153,959 sequences; 293,608,641 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4562 215 4e-51 seq52194 152 4e-32 seq58137 127 2e-24 seq89413 125 6e-24 seq9095 122 7e-23 >seq4562 Length=21325 Score = 215 bits (238), Expect = 4e-51 Identities = 1084/1704 (64%), Gaps = 66/1704 (4%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || || ||||| ||||| | || || || ||||| || || ||||| ||| Sbjct 21089 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 21030 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGCTGC-ACATT-GTTTGG--TAA 130519 ||||| | || ||||| ||| | ||||| || | || | |||| || Sbjct 21029 GTTTTTAAACCCATTTT----CCA--AGCGTGGAAATGAATCGACGTAAGTTTTCCATAG 20976 Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579 || |||| || || ||||||| ||||| ||| || |||||||| || || || Sbjct 20975 TTAGGTTTAGCAACATGGATGTTGAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCA 20916 Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638 || ||||| | | | ||| ||| | | |||||||| |||| ||||| | ||| || Sbjct 20915 GCTGCCATCTGTATGGATGTTTTCAGTGAA-ATCTCCCATACGGTTTTGTACAAATCTCT 20857 Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698 || | ||| || || |||| ||| | || |||||| |||||| ||| Sbjct 20856 TATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGGTT 20797 Query 130699 GCGCATACTTTTATCGTACAATCCAAGCTGTACAAGATCTTTTACCAAATGATTATTAAT 130758 |||| || ||| |||| || | | | ||| | | | ||||| || | Sbjct 20796 TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCAC 20737 Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 | |||| || |||| | ||| | ||| |||||| || || || |||||||| Sbjct 20736 TACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAA 20677 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 ||||| ||||||| | |||||||| |||| || || ||||| || | ||||| Sbjct 20676 AGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAG 20617 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 |||||| || | ||| || | | || ||| || | || |||| ||||| || Sbjct 20616 AGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTC 20557 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGA 130998 ||||| | |||| |||||||||| | || || || |||| || || ||||| Sbjct 20556 TGTAGGAGTT---TTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCC 20500 Query 130999 TTCGAACGATTCGTAGATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCC 131058 || | | ||| ||||| ||| | || |||||||| | || || Sbjct 20499 TTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAGTGCACC 20440 Query 131059 GTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGG 131118 |||||||| ||||| ||||||| ||| | || | |||| | || ||||||| Sbjct 20439 ATAATAAATAGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA 20380 Query 131119 AAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATG 131178 | | |||| || | ||| || ||||| | ||||| | |||| || | |||||||| Sbjct 20379 TATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATG 20320 Query 131179 TTTTAAATTACA--TTTACGCGAACATTCGGTG---GGATAAAGGTTAATGTCAATTATT 131233 | | | ||| | ||| || ||| | | ||||||| |||| ||||| | | Sbjct 20319 TCTCATATTTGAAGTTTTTGC-----TTCAGGGACAGGATAAAAATTAACATCAATAACT 20265 Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293 ||||||||||| | |||||| | ||||| ||| ||||| | |||| ||| || Sbjct 20264 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG 20205 Query 131294 CCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353 | |||| | |||| || | ||| || || || || || |||||| | Sbjct 20204 TTATTTTCAA------CAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACT 20151 Query 131354 TCGTCATAATCGCAA---TACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTG 131410 || || | | || || || |||| || | ||| | ||| || | || || ||| Sbjct 20150 TCATCTT---CTGAAGTGTATTGCACAACCTCTGTGCAAAGATTGCTACATTTAATAGTG 20094 Query 131411 CCCAAATTTTGTTGATTGCTTTTAGCATTCACATGG-TCCTTGTACATCATGTAGGGCGT 131469 || | ||||| |||||| || || || ||| | ||||| |||| |||||| || || Sbjct 20093 CCAAGATTTTTTTGATTACTCTTTCTGTT-ACAAGCATCCTTATACAACATGTATGGTGT 20035 Query 131470 GCCCGTTTCGACTTGAGTTTCAATAATGTA--TCGAAAGAGTTTTCGAGCAGACAATTGA 131527 || || || ||||| | ||| ||||| | || | | | | || |||| | ||| Sbjct 20034 ACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCATA-ACTCTT-GAGCTCTGACTTGT 19977 Query 131528 TATTTGTATTGGCCGCGTTT-TTCGTAATTTTCG---TACAACGTTTCAAAGTTTTGGCC 131583 | | | || || ||| ||| | || || | || || |||||| | | || Sbjct 19976 TTTATAAAT----CGTTTTTCTTCTTCATATTTGGTATATAATTCTTCAAATTCCTCTCC 19921 Query 131584 AAACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTG 131643 ||| | | | |||| || |||||||| || ||| || | | | Sbjct 19920 AAAGCAGTCAGCGAGGCCAGGACTGTCATGAGGACACATGAGACTCCAAACTTCATCTTT 19861 Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703 ||| |||| |||||||||| ||| || | |||||| || || ||||| ||||||||| | Sbjct 19860 TTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCT 19801 Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 | ||||| |||| | | || || |||| || || || || |||||||||||||| Sbjct 19800 CATTTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCA 19741 Query 131764 GGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACATG 131817 || || ||||| | ||| | |||||| |||| || || ||||||| |||| Sbjct 19740 AGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTG---TTTCCACCTTGATCTACATA 19684 Query 131818 ACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGT 131877 | | | ||||| || || | |||||| ||| | | ||| || | | ||||| || Sbjct 19683 TCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGT 19624 Query 131878 GCTCTTAATGTAGCTGCCATTGGCTCTGAT--TTTGTGAACGTTGAGTCCAATACCTCCG 131935 || ||||| || | |||||||| |||| | || | || || || || Sbjct 19623 GCCAGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGT--AAACCTATGCCACCA 19566 Query 131936 CCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCC 131995 | ||||||| |||| ||| |||| ||| ||| | | | |||||||| | ||| || Sbjct 19565 GCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCG 19506 Query 131996 GCGGCAATGTCGACTAAAAAGCAAGAGGACAACTGTTGGTGAAATGTGCCGGCTGAAAAC 132055 | || | | | || || ||||| | |||| | | |||| | || || ||| Sbjct 19505 TCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAAC 19446 Query 132056 AATGTGGGGCTGGCGTGTGTAAAA 132079 | ||| ||||| || ||||||||| Sbjct 19445 AGTGTAGGGCTTGCATGTGTAAAA 19422 >seq52194 Length=4646 Score = 152 bits (168), Expect = 4e-32 Identities = 174/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || || || |||||||| || || || || ||||| |||||||||||||| Sbjct 3662 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 3721 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || ||||| || || ||| |||||||||| |||||||| || || Sbjct 3722 AGAGTACGACCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 3781 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || ||||||| ||| | |||| | |||||||| || ||||||| Sbjct 3782 ATTCCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 3841 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 |||| || |||| ||| || || || || || |||||||| |||||| || || Sbjct 3842 TCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCATACCTCCT 3895 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| ||| ||||| | ||||| || ||||| || |||||||| Sbjct 4351 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 4410 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | ||||| |||||||| ||||| | || ||||| |||||||| || || Sbjct 4411 AAGGTACGTCCATCTTCCAGCTGTTTGCCGGCAAAGATAAGACGTTGTTGATCTGGGGGA 4470 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||||||| ||||| || | |||| | ||||| | | || ||| Sbjct 4471 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGACGGCTCTACT 4530 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||||| ||||| || || || || ||||| ||||||||| Sbjct 4531 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 4578 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | |||||| || | || || ||||| || ||||||||||| | Sbjct 3890 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 3949 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| || || ||||| ||| | || ||||| |||||||| || || Sbjct 3950 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 4009 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | || || ||||| ||||| ||| | |||| | ||||| | |||| || || Sbjct 4010 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGC-TCTAC 4068 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| | |||||| | ||| || || || ||||| ||||| |||||||| Sbjct 4069 TTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 4116 Score = 102 bits (112), Expect = 7e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||| ||||| || ||||| |||||||| || || || || | Sbjct 3434 CCACCGCGAAGACGAAGTACTAAATGCAAGGTAGATTCTTTTTGGATGTTATAATCCGAC 3493 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || | ||||||||| || | |||||||||||||| || || || Sbjct 3494 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 3553 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | ||||| || || |||||| || | |||| | |||||| | |||| ||||| Sbjct 3554 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGC-TCAAC 3612 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 || | ||| || | || || || ||||| || || ||||| |||||| || || Sbjct 3613 CTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCATACCTCCT 3667 >seq58137 Length=8097 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | ||||| |||||||||||||||||||| | | |||| || Sbjct 7747 CGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGTCCG 7688 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | || || || ||| |||| | ||| |||||||| || || | || || || Sbjct 7687 TCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTG 7628 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || ||| ||| | |||| | ||| || | | ||||||||| | ||| || Sbjct 7627 TCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATG 7568 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| ||||| || |||||||||||||| ||||| Sbjct 7567 GTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7533 >seq89413 Length=986 Score = 125 bits (138), Expect = 6e-24 Identities = 191/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 50268 GGTTCGTTCCACGCGGACACTCCTTTTTGCGGCTTCTGTATGGCGGCCCAAGGGTCGTGT 50327 || |||||||| | |||| ||||||||| || || |||| || ||||| || ||||| Sbjct 986 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 927 Query 50328 ATGGACACTTTAAAATCTTCCCGTCCCGCACACGATCGCTGCAACGCCTCGAAACTGCCG 50387 || || ||||| || || || || || ||| || ||||| | || | ||||||||| Sbjct 926 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCT 867 Query 50388 GTGATGGTTTTGAGGCTGTCGTTGATACCGTCGCCGCCGCAAATGGGAATGAAACCGTAC 50447 ||| ||| | || || ||||| ||||| ||||||||||| ||||| || ||||| Sbjct 866 TCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAG 807 Query 50448 AACAGATGAGTTAAATTTGGCACAGGCACTTTGTCCGCTGGAAAGTTGCGACCGTATACT 50507 | || ||||| | ||| || | ||| | || | || || || | | || || Sbjct 806 AGCAAGTGAGTAAGATTAGGTATAGGTATACGATCTACGGGGAATTTCCTAGGATAGACA 747 Query 50508 CCCCACTCAACAAAGTATGCCGCCACGACTTT 50539 ||||| || || ||||| || |||| ||||| Sbjct 746 CCCCATTCTACGAAGTAGGCACCCACAACTTT 715 >seq9095 Length=14658 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || ||||| || ||||| || || || ||||| ||||| || ||||| | Sbjct 5538 CGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 5597 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || || || || ||| |||| || | |||||||| || || | || ||||| Sbjct 5598 TCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 5657 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||||| | ||||| ||||||| || ||| Sbjct 5658 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5717 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| ||||| ||||||||||| |||||||| Sbjct 5718 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5752 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || ||||| || ||||| || || || ||||| ||||| || ||||| | Sbjct 4854 CGCAACACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 4913 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || || || || || |||| || | |||||||| || || | || ||||| Sbjct 4914 TCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCAGGAGGAATGCCTTCTTTG 4973 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| ||| | |||| | ||||| | ||||| ||||||| || ||| Sbjct 4974 TCCTGAATCTTTGCTTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTAATA 5033 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||||| ||||| ||||||||||| |||||||| Sbjct 5034 GTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 5068 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | || ||| | ||||| ||| || ||||| || || |||||||||||||| Sbjct 5982 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 6041 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| ||||| || || || |||| || | |||||||| || || Sbjct 6042 AGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGA 6101 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||||| ||| || || | |||| | || || | ||||| ||| Sbjct 6102 ATGCCCTCTTTATCCTGGATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 6161 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| |||||| ||||| ||||| ||||| |||||||| Sbjct 6162 TCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 6208 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| |||||||| ||||| || || |||||||||||||| || |||| | ||||| Sbjct 5771 TACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTC 5830 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || || || |||| || | ||||| || || || | || || ||||| Sbjct 5831 AAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTG 5890 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || ||| || | |||| | ||||| | || |||||||| || || |||| ||| Sbjct 5891 AATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTTTT 5950 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| ||||| || || ||||| |||||||| Sbjct 5951 GCCAGTCAGTGTCTTTACAAATATTTGCAT 5980 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27032 CCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTC 27091 ||||| || || || || ||||| || ||||||||||| ||||| || |||| | Sbjct 5309 CCGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATTATAGTCAGACAGAGTGCGTCC 5368 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||||| |||||||| || ||| |||| || | |||||| || || || | ||| || || Sbjct 5369 ATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCCTT 5428 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || || || || | |||||| || || | ||||| ||||| | ||| || Sbjct 5429 GTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGAT 5488 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||| || ||||| || || ||||| |||||||| Sbjct 5489 AGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 5524 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || || ||||| || || || ||||| ||||| || ||||| | Sbjct 6450 CGCAACACCAAGTGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGCCCA 6509 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 |||||||| || || |||||| |||| || | |||||||| || || | || || || Sbjct 6510 TCTTCGAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTG 6569 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | |||| | || || | ||||| ||||| | || || Sbjct 6570 TCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATG 6629 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || || | |||||| || ||||||||||| Sbjct 6630 GTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 6664 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | || ||| | ||| | || || ||||| ||||| ||||| ||||| || | | Sbjct 6210 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 6269 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| ||| | ||||| ||||| || || || |||| || | || ||||| || || Sbjct 6270 AGTGT-GCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 6328 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||||| || || ||| | |||| | || || | | ||||| Sbjct 6329 AATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 6388 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| |||| ||||| ||||| || || || || |||||||| Sbjct 6389 TTCTAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 6436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424137063582408